RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TYROBPO43914 113 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 PRAMEF2O60811 474 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 ULK1O75385 1050 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 AIFM1O95831 613 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CLPSP04118 112 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 ENO1P06733 434 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 MYL2P10916 166 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CPA3P15088 417 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CHN1P15882 459 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 SOX18P35713 384 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 ETV4P43268 484 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CLCN2P51788 898 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 RAP1GDS1P52306 607 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 NAGLUP54802 743 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 FOXA1P55317 472 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 TRA2BP62995 288 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 RAE1P78406 368 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 FOLH1Q04609 750 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 ZNF844Q08AG5 666 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CSTF3Q12996 717 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 PCLAFQ15004 111 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 RNF165Q6ZSG1 346 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 COMMD6Q7Z4G1 85 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 TRIM46Q7Z4K8 759 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CLNKQ7Z7G1 428 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 ST13P4Q8IZP2 240 aaPredicted RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 C4orf33Q8N1A6 199 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CDYL2Q8N8U2 506 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 GBP7Q8N8V2 638 aaPredicted RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 OR14A16Q8NHC5 309 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.04□□□□□ -0.96
RNF4-221ENST00000513643 METTL6Q8TCB7 284 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 SELENOMQ8WWX9 145 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 DAZLQ92904 295 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 NCLNQ969V3 563 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 TM4SF18Q96CE8 201 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 VMP1Q96GC9 406 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 SENP5Q96HI0 755 aaPredicted RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 SIGLEC12Q96PQ1 595 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 MRPL1Q9BYD6 325 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 ACPTQ9BZG2 426 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 ELOVL6Q9H5J4 265 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 CDCP1Q9H5V8 836 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 PNO1Q9NRX1 252 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 TEX10Q9NXF1 929 aaPredicted RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 AHSPQ9NZD4 102 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 VPS29Q9UBQ0 182 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 SPACA6W5XKT8 324 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 DOPEY2Q9Y3R5 2298 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 WIPF3A6NGB9 483 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 SMIM23A6NLE4 172 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 GABRR3A8MPY1 467 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 ZNF354AO60765 605 aaPredicted RBP9.03□□□□□ -0.96
RNF4-221ENST00000513643 PRKRAO75569 313 aaKnown RBP9.03□□□□□ -0.96
RNF4-221ENST00000513643 ZFAND5O76080 213 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 KRT6AP02538 564 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 GBAP04062 536 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 KRT6BP04259 564 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 KLK1P06870 262 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 SLC35E2P0CK97 266 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 CREB1P16220 341 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 S1PR1P21453 382 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 GNLYP22749 145 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 TLX1P31314 330 aaPredicted RBP9.03□□□□□ -0.96
RNF4-221ENST00000513643 BUD31P41223 144 aaPredicted RBP9.03□□□□□ -0.96
RNF4-221ENST00000513643 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 KRT6CP48668 564 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 HTR6P50406 440 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 HLCSP50747 726 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 TDGF1P3P51864 188 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 TAS2R50P59544 299 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 STX4Q12846 297 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 SPRED3Q2MJR0 410 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 LIPMQ5VYY2 423 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 TTC19Q6DKK2 380 aaPredicted RBP9.03□□□□□ -0.96
RNF4-221ENST00000513643 SPINK14Q6IE38 97 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 PAGE2Q7Z2X7 111 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 C10orf107Q8IVU9 208 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 OR4N5Q8IXE1 308 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 ZNF321PQ8N8H1 164 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 ST6GALNAC3Q8NDV1 305 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 DNAJB8Q8NHS0 232 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 SLC2A12Q8TD20 617 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 GRHL3Q8TE85 626 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 APOPT1Q96IL0 206 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 CNDP1Q96KN2 507 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 GATA5Q9BWX5 397 aaPredicted RBP9.03□□□□□ -0.96
RNF4-221ENST00000513643 DEFB126Q9BYW3 111 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 RYDENQ9NUL5 291 aaKnown RBP9.03□□□□□ -0.96
RNF4-221ENST00000513643 ABI3Q9P2A4 366 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 MYOTQ9UBF9 498 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 PCDHA9Q9Y5H5 950 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 CLCA3PQ9Y6N3 262 aa9.03□□□□□ -0.96
RNF4-221ENST00000513643 TRBV11-1A0A0K0K1C0 115 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 MYOCOSA0A1B0GUC4 107 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 A0A1W2PS29 197 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 TLDC2A0PJX2 215 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 C17orf105B2RV13 164 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 HRKO00198 91 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms