RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	MCOLN1	Q9GZU1	580 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	ZNF768	Q9H5H4	540 aa	Known RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	NSUN3	Q9H649	340 aa	Known RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	POFUT2	Q9Y2G5	429 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	PCDHGB7	Q9Y5F8	929 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	SSNA1	O43805	119 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	GPR32	O75388	356 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	POU3F2	P20265	443 aa	Predicted RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	PBLD	P30039	288 aa	Predicted RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	SRP9	P49458	86 aa	Known RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	AIF1	P55008	147 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	CLDN8	P56748	225 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	C1D	Q13901	141 aa	Known RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	RASGRP3	Q8IV61	690 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	PM20D2	Q8IYS1	436 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	CLRN3	Q8NCR9	226 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	AP3S1	Q92572	193 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	C7orf34	Q96L11	122 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	REG4	Q9BYZ8	158 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	ZYG11B	Q9C0D3	744 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	TMEM168	Q9H0V1	697 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	OR51J1	Q9H342	316 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	NDUFB11	Q9NX14	153 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	LYAR	Q9NX58	379 aa	Known RBP	10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	FKBPL	Q9UIM3	349 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	CRLS1	Q9UJA2	301 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	HCN2	Q9UL51	889 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	LIPT1	Q9Y234	373 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	BRWD3	Q6RI45	1802 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	PHIP	Q8WWQ0	1821 aa		10.64	□□□□□ -0.71
PDCD6-210	ENST00000513582	DNAJC25-GNG10	A0A024R161	153 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	MFSD2B	A6NFX1	497 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	FAM74A7	A6NL05	159 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	C2orf81	A6NN90	581 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	IGFBP1	P08833	259 aa	Predicted RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	IL2	P60568	153 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	RPS14	P62263	151 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	RPS25	P62851	125 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	KCNJ10	P78508	379 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	MAP2K5	Q13163	448 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	FAM74A3	Q4VXF1	159 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ATAT1	Q5SQI0	421 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ALKAL2	Q6UX46	152 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	GDPGP1	Q6ZNW5	385 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	TMEM151B	Q8IW70	566 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	PTPN18	Q99952	460 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	POLR1E	Q9GZS1	481 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	EMC7	Q9NPA0	242 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	KCTD5	Q9NXV2	234 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	SMIM35	A0A1B0GVV1	85 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	FPGT	O14772	594 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	IRAK2	O43187	625 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	LDOC1	O95751	146 aa	Predicted RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	SEMG1	P04279	462 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ASGR1	P07306	291 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	RHOC	P08134	193 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	RHCE	P18577	417 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ITGB7	P26010	798 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	MAPK1	P28482	360 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	HNMT	P50135	292 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	CCL23	P55773	120 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	PPP3R1	P63098	170 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	UAP1L1	Q3KQV9	507 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	FBXL22	Q6P050	247 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	TMEM107	Q6UX40	140 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ADGRF3	Q8IZF5	1079 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	CLDN22	Q8N7P3	220 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	TM9SF4	Q92544	642 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	SERPINB11	Q96P15	392 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	SECISBP2	Q96T21	854 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	PKMYT1	Q99640	499 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	SH3BP4	Q9P0V3	963 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	MLX	Q9UH92	298 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	CCL27	Q9Y4X3	112 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	CHURC1-FNTB	B4DL54	471 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	CA12	O43570	354 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	RPP40	O75818	363 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	OTC	P00480	354 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	LPL	P06858	475 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ACPP	P15309	386 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	HOXB6	P17509	224 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	MC4R	P32245	332 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	FLI1	Q01543	452 aa	Predicted RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	RBBP4	Q09028	425 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	MAD2L1	Q13257	205 aa	Predicted RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ZNF177	Q13360	481 aa	Predicted RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	TEAD4	Q15561	434 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	ZNF730	Q6ZMV8	503 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	PTOV1	Q86YD1	416 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	NKAP	Q8N5F7	415 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	KIAA1143	Q96AT1	154 aa	Predicted RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	IMP4	Q96G21	291 aa	Known RBP	10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	COPS8	Q99627	209 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	MND1	Q9BWT6	205 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	SAP130	Q9H0E3	1048 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	NDUFAF4	Q9P032	175 aa		10.63	□□□□□ -0.71
PDCD6-210	ENST00000513582	PPT2	Q9UMR5	302 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms