RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CNSTQ6PJW8 725 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 TMEM220Q6QAJ8 160 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SPESP1Q6UW49 350 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 KDELC1Q6UW63 502 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM83HQ6ZRV2 1179 aaPredicted RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 GAS2L3Q86XJ1 694 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 PHF13Q86YI8 300 aaPredicted RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 HIPK1Q86Z02 1210 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 P3H2Q8IVL5 708 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ADGRF3Q8IZF5 1079 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM109AQ8N4B1 249 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SIRT6Q8N6T7 355 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 NPWQ8N729 165 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 PSD4Q8NDX1 1056 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 MDS2Q8NDY4 140 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 GDAP1Q8TB36 358 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ARRDC2Q8TBH0 407 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 STT3BQ8TCJ2 826 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SMARCE1Q969G3 411 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ZUFSPQ96AP4 578 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 IMMP1LQ96LU5 166 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 TIGD1Q96MW7 591 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 TSGA13Q96PP4 275 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SMIM14Q96QK8 99 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM118BQ9BPY3 351 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 C11orf70Q9BRQ4 267 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 GPATCH1Q9BRR8 931 aaKnown RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 UTP23Q9BRU9 249 aaKnown RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CRB3Q9BUF7 120 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 STK33Q9BYT3 514 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 WWP1Q9H0M0 922 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 TRABDQ9H4I3 376 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 DHX35Q9H5Z1 703 aaKnown RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 MVB12BQ9H7P6 319 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 PLEKHF2Q9H8W4 249 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ZWILCHQ9H900 591 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SMURF2Q9HAU4 748 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF304Q9HCX3 659 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ARFGAP3Q9NP61 516 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 NT5MQ9NPB1 228 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SIX2Q9NPC8 291 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 NLRC4Q9NPP4 1024 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SACM1LQ9NTJ5 587 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 EURLQ9NYK6 297 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 OR6C2Q9NZP2 312 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CWC15Q9P013 229 aaKnown RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 B4GALT7Q9UBV7 327 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF282Q9UDV7 671 aaPredicted RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 C3orf18Q9UK00 162 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CDC14AQ9UNH5 594 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CHKBQ9Y259 395 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 COMMD10Q9Y6G5 202 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SCN2AQ99250 2005 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ARID1AO14497 2285 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 CUBNO60494 3623 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 A0A0J9YY10 115 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TCRBV5S1A1TA0A578 114 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 A8MUI8 341 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 KLRC4-KLRK1H3BQV0 150 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 H7C1Q1 480 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 IFRD1O00458 451 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 RASGRF2O14827 1237 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PRPF4O43172 522 aaKnown RBP eCLIP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 HCRTR1O43613 425 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TLX2O43763 284 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 MTX2O75431 263 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 SIX3O95343 332 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TOMM40O96008 361 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 CYC1P08574 325 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PVRP15151 417 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF24P17028 368 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 CD53P19397 219 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PPIFP30405 207 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 SHMT2P34897 504 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 HTR3AP46098 478 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 NSFP46459 744 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ALDH9A1P49189 494 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 EMP2P54851 167 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 UCP3P55916 312 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 RPL7AP62424 266 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PMP22Q01453 160 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 BTKQ06187 659 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 RUNX1T1Q06455 604 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF33BQ06732 778 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PMPCAQ10713 525 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 RPA4Q13156 261 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 CTBP1Q13363 440 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 DAG1Q14118 895 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 IHHQ14623 411 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 KIR2DS3Q14952 304 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 BRD3Q15059 726 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 RBMS2Q15434 407 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ZIC1Q15915 447 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 MEP1AQ16819 746 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 FBXL19-AS1Q494R0 122 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PPP6R3Q5H9R7 873 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ACER2Q5QJU3 275 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 GPRC6AQ5T6X5 926 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TAF3Q5VWG9 929 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 HEPHL1Q6MZM0 1159 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms