RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 JSRP1Q96MG2 331 aaPredicted RBP17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 RUNDC3BQ96NL0 473 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 SERPINB12Q96P63 405 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 QPCTLQ9NXS2 382 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 GALNT8Q9NY28 637 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 SLC6A5Q9Y345 797 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 DYRK1BQ9Y463 629 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 SH3D21A4FU49 640 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 MBD3L4A6NDZ8 208 aaPredicted RBP17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 MBD3L3A6NE82 208 aaPredicted RBP17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 MBD3L5A6NJ08 208 aaPredicted RBP17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 SMPD2O60906 423 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 MAGEA3P43357 314 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 PPP2R2BQ00005 443 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 KRTAP1-1Q07627 177 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 GPS1Q13098 491 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 ADPRMQ3LIE5 342 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 BICRALQ6AI39 1079 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 SLCO4C1Q6ZQN7 724 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 LMNTD2Q8IXW0 634 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 MBD3L2Q8NHZ7 208 aaPredicted RBP17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 PPP1R14CQ8TAE6 165 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 ATL1Q8WXF7 558 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 SMPDL3BQ92485 455 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 CCT6BQ92526 530 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 ANKRD9Q96BM1 317 aaPredicted RBP17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 DACH2Q96NX9 599 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 BDH2Q9BUT1 245 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 TSPY26PQ9H489 355 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 MRPS33Q9Y291 106 aaKnown RBP17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 NPFFR2Q9Y5X5 522 aa17.42■□□□□ 0.38
HMGCS1-206ENST00000511774 EXPH5Q8NEV8 1989 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 MAGEB16A2A368 324 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PRAMEF4O60810 478 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 TRIM3O75382 744 aaPredicted RBP17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 C1QAP02745 245 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 AHSGP02765 367 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 IGKV3-11P04433 115 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 TNNI3P19429 210 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 GDF1P27539 372 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 SLCO1A2P46721 670 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 IL2P60568 153 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 STX4Q12846 297 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 SLBPQ14493 270 aaKnown RBP eCLIP17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 FNDC7Q5VTL7 733 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PRAMEF9Q5VWM5 478 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 VASNQ6EMK4 673 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 ABHD17CQ6PCB6 329 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PRSS57Q6UWY2 283 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PLXDC2Q6UX71 529 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 CAPN12Q6ZSI9 719 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PHC2Q8IXK0 858 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 OR2L5Q8NG80 312 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 NUBPLQ8TB37 319 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 CALML6Q8TD86 181 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 HSPBAP1Q96EW2 488 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PERPQ96FX8 193 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 SENP5Q96HI0 755 aaPredicted RBP17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 TRIB1Q96RU8 372 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 SERINC2Q96SA4 455 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PIP5K1AQ99755 562 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 MAPKAP1Q9BPZ7 522 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 RBM24Q9BX46 236 aaKnown RBP17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 PRDM7Q9NQW5 492 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 CAMK2AQ9UQM7 478 aa17.41■□□□□ 0.38
HMGCS1-206ENST00000511774 ABCA1O95477 2261 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 CD8B2A6NJW9 211 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 ACSL3O95573 720 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 MLNP12872 115 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 GDF5P43026 501 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 TMIGD1Q6UXZ0 262 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 ZNF793Q6ZN11 406 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 UBE3DQ7Z6J8 389 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 LUZP2Q86TE4 346 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 FAM13CQ8NE31 585 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 WDYHV1Q96HA8 205 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 FAM167BQ9BTA0 163 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 UBQLN3Q9H347 655 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 C6orf203Q9P0P8 240 aaPredicted RBP17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 MAD1L1Q9Y6D9 718 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 KCNE2Q9Y6J6 123 aa17.4■□□□□ 0.38
HMGCS1-206ENST00000511774 ANK2Q01484 3957 aa17.39■□□□□ 0.38
HMGCS1-206ENST00000511774 CDC7O00311 574 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 CRLF1O75462 422 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 FBXO45P0C2W1 286 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 C1GALT1C1LP0DN25 315 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 BMP7P18075 431 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 OPRM1P35372 400 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 MTTPP55157 894 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 SARNPP82979 210 aaKnown RBP17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 CBLBQ13191 982 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 TMEM64Q6YI46 380 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 OR4N5Q8IXE1 308 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 SLC44A1Q8WWI5 657 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 PPWD1Q96BP3 646 aaKnown RBP17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 F2RL3Q96RI0 385 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 DOHHQ9BU89 302 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 UGT2B28Q9BY64 529 aa17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 TRIM54Q9BYV2 358 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms