RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 DDX47Q9H0S4 455 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 MOB1AQ9H8S9 216 aa2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 PANK3Q9H999 370 aa2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 ACOXLQ9NUZ1 547 aa2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 CYP39A1Q9NYL5 469 aa2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 HMG20BQ9P0W2 317 aa2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 FETUBQ9UGM5 382 aa2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 UBQLN2Q9UHD9 624 aa2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 NIP7Q9Y221 180 aaKnown RBP eCLIP2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 STRAPQ9Y3F4 350 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-207ENST00000511409 IGLV4-3A0A075B6K6 122 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 SH3PXD2BA1X283 911 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 MACROD2A1Z1Q3 448 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 YJEFN3A6XGL0 299 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 ARHGEF33A8MVX0 844 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 ZBTB14O43829 449 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 DUSP11O75319 330 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 MBL2P11226 248 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 STMN1P16949 149 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 CYP3A5P20815 502 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 SLC1A6P48664 564 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 HNRNPFP52597 415 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 RIDAP52758 137 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 RPL27P61353 136 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 MFGE8Q08431 387 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 CD300CQ08708 224 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 FCHO2Q0JRZ9 810 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 HSPA14Q0VDF9 509 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 TSTA3Q13630 321 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 ENPP2Q13822 863 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 LY6DQ14210 128 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 MEF2DQ14814 521 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 P2RY14Q15391 338 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 CARTPTQ16568 116 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 MUC21Q5SSG8 566 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 PRAMEF7Q5VXH5 474 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 RTL3Q8N8U3 475 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 LEMD2Q8NC56 503 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 CCNYQ8ND76 341 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 PRSS33Q8NF86 280 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 MRPL53Q96EL3 112 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 RCHY1Q96PM5 261 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 ATF6BQ99941 703 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 RBM4BQ9BQ04 359 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 ABCG8Q9H221 673 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 SLC26A1Q9H2B4 701 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 GANQ9H2C0 597 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 CXXC4Q9H2H0 198 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 LIME1Q9H400 295 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 TUBB1Q9H4B7 451 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 DPEP3Q9H4B8 488 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 PRMT8Q9NR22 394 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 DEPPQ9NTK1 212 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 PIGVQ9NUD9 493 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 GTSE1Q9NYZ3 720 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 TECRQ9NZ01 308 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 ERVK-18Q9QC07 812 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 COPS7AQ9UBW8 275 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 NARFQ9UHQ1 456 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 TRMT6Q9UJA5 497 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 APPL1Q9UKG1 709 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 MGAT4AQ9UM21 535 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 TEX264Q9Y6I9 313 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 ABCC9O60706 1549 aa2.81□□□□□ -1.96
TRAPPC11-207ENST00000511409 KIF7Q2M1P5 1343 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 RPGRIP1LQ68CZ1 1315 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 TRBV2A0A0J9YWF9 115 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 A0A1B0GU03 582 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 NTN3O00634 580 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 BCAS2O75934 225 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 TXNDC12O95881 172 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 TBX6O95947 436 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 FHP07954 510 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 ALDH3B1P43353 468 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 ACADSBP45954 432 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 ZFP36L2P47974 494 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 ATP4BP51164 291 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 CNN1P51911 297 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 LIMK2P53671 638 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 SRP54P61011 504 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 PAX8Q06710 450 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 FASTKQ14296 549 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 GPAT3Q53EU6 434 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 CMPK2Q5EBM0 449 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 C1orf189Q5VU69 101 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 BATF2Q8N1L9 274 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 PARP8Q8N3A8 854 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 RELL2Q8NC24 303 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 GOLGA5Q8TBA6 731 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 URGCPQ8TCY9 931 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 C16orf58Q96GQ5 468 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 RUNDC3BQ96NL0 473 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 TAAR6Q96RI8 345 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 RUFY1Q96T51 708 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 UBXN6Q9BZV1 441 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 LRRCC1Q9C099 1032 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 TRPV6Q9H1D0 765 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 CARD9Q9H257 536 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 TMEM245Q9H330 911 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 HEXA-AS1Q9H8Q6 139 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms