RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SERPINB2P05120 415 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PGK2P07205 417 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ZDHHC11BP0C7U3 371 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 STAG3L1P0CL83 205 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 C8orf89P0DMQ9 161 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF7P17097 686 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PSMC3P17980 439 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RAB3AP20336 220 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MPIP34949 423 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 FDFT1P37268 417 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CDKN1AP38936 164 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PBX3P40426 434 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MAGEA6P43360 314 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RGS8P57771 180 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 NAA20P61599 178 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RPS16P62249 146 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CSNK2A1P68400 391 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SIM1P81133 766 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 BDH1Q02338 343 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 FOXM1Q08050 763 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 BST1Q10588 318 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SCAPQ12770 1279 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 EIF4EBP2Q13542 120 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CAMK1Q14012 370 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 HLXQ14774 488 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PGM5Q15124 567 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TGFBIQ15582 683 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SF1Q15637 639 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TOMM34Q15785 309 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ME3Q16798 604 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 DUSP7Q16829 419 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 KIZQ2M2Z5 673 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 UGT3A2Q3SY77 523 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 C3orf38Q5JPI3 329 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF5Q5TYX0 476 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ABHD17BQ5VST6 288 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 IRAK1BP1Q5VVH5 260 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF9Q5VWM5 478 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 KHDRBS2Q5VWX1 349 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF6Q5VXH4 476 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 STYK1Q6J9G0 422 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ZSCAN25Q6NSZ9 544 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 NIPAL1Q6NVV3 410 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 KIAA1324Q6UXG2 1013 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CERS6Q6ZMG9 384 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 LRRC74BQ6ZQY2 392 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 EIF3MQ7L2H7 374 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SSX9Q7RTT3 188 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 GSTA5Q7RTV2 222 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 BMP8AQ7Z5Y6 402 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SNX20Q7Z614 316 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MYPOPQ86VE0 399 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RASGRP3Q8IV61 690 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 GCNT2Q8N0V5 402 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 STK40Q8N2I9 435 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF561Q8N587 486 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CCDC185Q8N715 623 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 GATSQ8NAP1 163 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 NOA1Q8NC60 698 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CSNK2A3Q8NEV1 391 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 OR52N2Q8NGI0 321 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 OR2L8Q8NGY9 312 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RAET1EQ8TD07 263 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 GRHL3Q8TE85 626 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 FIG4Q92562 907 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TMBIM1Q969X1 311 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 S100PBPQ96BU1 408 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 STAMBPL1Q96FJ0 436 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 FAR2Q96K12 515 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SNX22Q96L94 193 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 LINC00615Q96LM1 132 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 C10orf90Q96M02 699 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RILPQ96NA2 401 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PPP1R2P1Q96PQ5 205 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SLITRK1Q96PX8 696 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TGS1Q96RS0 853 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ELF4Q99607 663 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 GPA33Q99795 319 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 P2RY13Q9BPV8 354 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MAPKAP1Q9BPZ7 522 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 C17orf80Q9BSJ5 609 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MAGEB5Q9BZ81 275 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 OR2B2Q9GZK3 357 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SMOC2Q9H3U7 446 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 DPEP2Q9H4A9 486 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 NOL11Q9H8H0 719 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MED20Q9H944 212 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CNOT10Q9H9A5 744 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 AKIRIN1Q9H9L7 192 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 RAVER2Q9HCJ3 691 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CTPS2Q9NRF8 586 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 PCDHB16Q9NRJ7 776 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ABCB10Q9NRK6 738 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TXLNGQ9NUQ3 528 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 TMEM248Q9NWD8 314 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 MRPL22Q9NWU5 206 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 WSB2Q9NYS7 404 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 GPRC5DQ9NZD1 345 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms