RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 C7orf57Q8NEG2 295 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 NUBPLQ8TB37 319 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 ZNF721Q8TF20 911 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 DACH2Q96NX9 599 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 SERINC2Q96SA4 455 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 NDNQ99608 321 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 FAM167BQ9BTA0 163 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 PRDM14Q9GZV8 571 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 XAB2Q9HCS7 855 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 C20orf96Q9NUD7 363 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 CNIH4Q9P003 139 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 DAPP1Q9UN19 280 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 KCNE2Q9Y6J6 123 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 ABCA1O95477 2261 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 A0A0G2JN53 185 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 MBD3L4A6NDZ8 208 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 MBD3L3A6NE82 208 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 MBD3L5A6NJ08 208 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 CD8B2A6NJW9 211 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 C17orf105B2RV13 164 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 KIF2AO00139 706 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 CES2O00748 559 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 KCNAB3O43448 404 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 SMPD2O60906 423 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 GUCA1CO95843 209 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 C1QAP02745 245 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 CTSSP25774 331 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 HPDP32754 393 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 MAGEA3P43357 314 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 KCNJ1P48048 391 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 CDKN2DP55273 166 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 WNT3P56703 355 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 ASPHQ12797 758 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 STX4Q12846 297 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 DUSP8Q13202 625 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 HSP90AA5PQ58FG0 334 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 ANKRD22Q5VYY1 191 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 TRIM40Q6P9F5 258 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 SBSNQ6UWP8 590 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 LYPD8Q6UX82 237 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 RASGEF1CQ8N431 466 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 MCUQ8NE86 351 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 OR2L5Q8NG80 312 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 MBD3L2Q8NHZ7 208 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 SLC22A8Q8TCC7 542 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 MAIP1Q8WWC4 291 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 SREK1Q8WXA9 508 aaKnown RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 TMEM158Q8WZ71 300 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 PIGTQ969N2 578 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 ISL2Q96A47 359 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 KIAA1191Q96A73 305 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 NTNG2Q96CW9 530 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 SPACA9Q96E40 222 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 PDLIM5Q96HC4 596 aaKnown RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 Q96MF0 132 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 SERPINB12Q96P63 405 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 CSF3RQ99062 836 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 TIMP4Q99727 224 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 WDR83Q9BRX9 315 aaKnown RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 PITHD1Q9GZP4 211 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-211ENST00000508546 EPB41L4BQ9H329 900 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 COPS7AQ9UBW8 275 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 SLC22A14Q9Y267 594 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 IKBKGQ9Y6K9 419 aa8.62□□□□□ -1.03
NEDD9-211ENST00000508546 USF3Q68DE3 2245 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 C15orf38-AP3S2A0A0A6YYH1 394 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 SH3D21A4FU49 640 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 EEF1E1-BLOC1S5C9J1V9 151 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 EEF1E1O43324 174 aaKnown RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 H2AFYO75367 372 aaKnown RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 CLEC3AO75596 197 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 ETHE1O95571 254 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 TBX6O95947 436 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 C1GALT1C1LP0DN25 315 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 GNAZP19086 355 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 TNNI3P19429 210 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 GDF1P27539 372 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 GABRB3P28472 473 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 TRPC1P48995 793 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 MTTPP55157 894 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 GPS1Q13098 491 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 POU4F3Q15319 338 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 RBM20Q5T481 1227 aaKnown RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 PRAMEF20Q5VT98 475 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 VASNQ6EMK4 673 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 HMBOX1Q6NT76 420 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 ABHD17CQ6PCB6 329 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 TMIGD1Q6UXZ0 262 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 SLCO4C1Q6ZQN7 724 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 SYDE1Q6ZW31 735 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 GALNT7Q86SF2 657 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 AGGF1Q8N302 714 aaeCLIP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 VWA5B2Q8N398 1253 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 GABPB2Q8TAK5 448 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 SIGLEC10Q96LC7 697 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 REXO4Q9GZR2 422 aaKnown RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 NT5DC2Q9H857 520 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 CALHM2Q9HA72 323 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 LYRM4Q9HD34 91 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms