RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FAM213AQ9BRX8 229 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 FEM1AQ9BSK4 669 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 PDCD10Q9BUL8 212 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 MLPHQ9BV36 600 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 KATNAL1Q9BW62 490 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 MND1Q9BWT6 205 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 NXF2Q9GZY0 626 aaKnown RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 RACGAP1Q9H0H5 632 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 SLCO5A1Q9H2Y9 848 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 C11orf49Q9H6J7 331 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 RANBP3Q9H6Z4 567 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 C3orf14Q9HBI5 128 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 EML4Q9HC35 981 aaKnown RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 ZFP14Q9HCL3 533 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 UBE2TQ9NPD8 197 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 HEYLQ9NQ87 328 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 KLHL1Q9NR64 748 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 ADPRHL2Q9NX46 363 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 NSMCE4AQ9NXX6 385 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 ERAP1Q9NZ08 941 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 IL37Q9NZH6 218 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 TMEM181Q9P2C4 612 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 KLQ9UEF7 1012 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF639Q9UID6 485 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 OSGIN1Q9UJX0 560 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 C3orf18Q9UK00 162 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 NOCTQ9UK39 431 aaKnown RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 ERVW-1Q9UQF0 538 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 MTF2Q9Y483 593 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 RIPK3Q9Y572 518 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 PTPRJQ12913 1337 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 LOXHD1Q8IVV2 1947 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 MYO9BQ13459 2157 aa4.36□□□□□ -1.71
PDLIM5-211ENST00000508531 A0A075B6Q4 140 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CYP3A7-CYP3A51PA0A087WV96 503 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ATP6AP2A0A1C7CYW4 349 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 MEIOCA2RUB1 952 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PCP4L1A6NKN8 68 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM159BA6NKW6 160 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 C2orf74A8MZ97 194 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 F8W036 122 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 STX16-NPEPL1H3BU86 382 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 APOC4-APOC2K7ER74 178 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 UBXN8O00124 270 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 BTN3A3O00478 584 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CTDSP2O14595 271 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RGS5O15539 181 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 KCNN4O15554 427 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC28A2O43868 658 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC22A5O76082 557 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RHOBTB1O94844 696 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 KCNK2O95069 426 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 GCNT3O95395 438 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TDP2O95551 362 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 LSM8O95777 96 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 IFNB1P01574 187 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 APOC2P02655 101 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ALPPP05187 535 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ANXA2P07355 339 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 NGFRP08138 427 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SMIM6P0DI80 62 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 THRBP10828 461 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 FGF3P11487 239 aaPredicted RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SFTPCP11686 197 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 MLNP12872 115 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 HLA-EP13747 358 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PLA2G2AP14555 144 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 HOXB2P14652 356 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ALOX12P18054 663 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TNNI3P19429 210 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 MMP8P22894 467 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CYP3A7P24462 503 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PTBP1P26599 531 aaKnown RBP eCLIP4.35□□□□□ -1.714e-6■■■■□ 21.1
PDLIM5-211ENST00000508531 NDUFS1P28331 727 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 DUSP1P28562 367 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ADORA1P30542 326 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RFC2P35250 354 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 HNF1BP35680 557 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 HMGCLP35914 325 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ELK3P41970 407 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SOX2P48431 317 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ERFP50548 548 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CDH13P55290 713 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RPS8P62241 208 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 MRPS5P82675 430 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 FRG1Q14331 258 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PTGR1Q14914 329 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 QPRTQ15274 297 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 GRK1Q15835 563 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 BAK1Q16611 211 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 LRRC26Q2I0M4 334 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 BTBD16Q32M84 506 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PARP15Q460N3 678 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CYBRD1Q53TN4 286 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TEX30Q5JUR7 227 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 HES5Q5TA89 166 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ATF7IP2Q5U623 682 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 LRRC8EQ6NSJ5 796 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms