RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 PRR5LQ6MZQ0 368 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 MACC1Q6ZN28 852 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 CHST3Q7LGC8 479 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 ABI3BPQ7Z7G0 1075 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 RPAINQ86UA6 219 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 RAD54LQ92698 747 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 VPS33AQ96AX1 596 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 MOB1AQ9H8S9 216 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 NSG2Q9Y328 171 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 CCL27Q9Y4X3 112 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 EVC2Q86UK5 1308 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 ARFGEF2Q9Y6D5 1785 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 A0A1W2PQ72 361 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 INPP4BO15327 924 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 MLNRO43193 412 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 TXNL1O43396 289 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 PENKP01210 267 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 SSTR1P30872 391 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 FCGR2BP31994 310 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 FCGR2CP31995 323 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 TNK1Q13470 666 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 GCKRQ14397 625 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 UGCGQ16739 394 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 ZNF542PQ5EBM4 170 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 LEMD1Q68G75 181 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 Q7L0L9 218 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 PCGF5Q86SE9 256 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 RHOXF1Q8NHV9 184 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 PCDHB18PQ96TA0 734 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 LRRCC1Q9C099 1032 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 RABEP2Q9H5N1 569 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 C10orf88Q9H8K7 445 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 C3orf14Q9HBI5 128 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 TNFRSF19Q9NS68 423 aa3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 RBBP6Q7Z6E9 1792 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-206ENST00000508524 NCOR1O75376 2440 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 ANKRD26Q9UPS8 1709 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 RTL1A6NKG5 1358 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 CCDC175P0C221 793 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 CD1DP15813 335 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 GOT1P17174 413 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 HMGB2P26583 209 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 EEF1DP29692 281 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 RIDAP52758 137 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 CRYBA2P53672 197 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 TOMM20Q15388 145 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 TEX35Q5T0J7 233 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 C11orf57Q6ZUT1 292 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 TMUB2Q71RG4 321 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 ERN2Q76MJ5 926 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 MCM10Q7L590 875 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 AGAP11Q8TF27 550 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 GRK7Q8WTQ7 553 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 RBM24Q9BX46 236 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 STRADBQ9C0K7 418 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 SLITRK2Q9H156 845 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 C5orf66Q9H5L9 145 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 CLEC5AQ9NY25 188 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 NKIRAS2Q9NYR9 191 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 NARFQ9UHQ1 456 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 RUVBL2Q9Y230 463 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 AUP1Q9Y679 476 aa3.93□□□□□ -1.78
TOPBP1-206ENST00000508524 TONSLQ96HA7 1378 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 NPIPA3F8WFD2 350 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 FLRT2O43155 660 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 DNTTP04053 509 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 CTNNA2P26232 953 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 RAD23AP54725 363 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 LRRC37A5PQ49AS3 106 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 C15orf52Q6ZUT6 534 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 USP50Q70EL3 339 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 CCAR2Q8N163 923 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 LSMEM1Q8N8F7 131 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 OCC1Q8TAD7 63 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 CD99L2Q8TCZ2 262 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 RPF1Q9H9Y2 349 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 WDR41Q9HAD4 459 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 ABCB10Q9NRK6 738 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 SNX7Q9UNH6 387 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 VSIG4Q9Y279 399 aa3.92□□□□□ -1.78
TOPBP1-206ENST00000508524 CFAP54Q96N23 3096 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 CACNA1GO43497 2377 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 SCN7AQ01118 1682 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 MUC6Q6W4X9 2439 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 WDR87Q6ZQQ6 2873 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 WDFY4Q6ZS81 3184 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 PGRMC2O15173 223 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 FCGR3BO75015 233 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 OR6B1O95007 311 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 SEMA4FO95754 770 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 FAM200BP0CF97 657 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 EEF2P13639 858 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 OR3A3P47888 321 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 EVCP57679 992 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 PKN2Q16513 984 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 POM121L1PQ3SYA9 428 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 PRR30Q53SZ7 412 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 EMBQ6PCB8 327 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 CROCCP3Q8IVE0 287 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms