RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 GTPBP10A4D1E9 387 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 KBTBD13C9JR72 458 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 H0YIG0 161 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 M0R296 226 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 HDAC3O15379 428 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 OR6A2O95222 327 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 HSP90AA1P07900 732 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 OR1D2P34982 312 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 TNFRSF4P43489 277 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 MEOX2P50222 304 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 HLCSP50747 726 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 GSG1Q2KHT4 349 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 WDR25Q64LD2 544 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 CAPN13Q6MZZ7 669 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 CAVIN1Q6NZI2 390 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 PODNL1Q6PEZ8 512 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 CLEC4GQ6UXB4 293 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 RAPH1Q70E73 1250 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 ZNF525Q8N782 197 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 ZNF671Q8TAW3 534 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 SETD6Q8TBK2 473 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 DNASE1L2Q92874 299 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 PLSCR3Q9NRY6 295 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 TERF2IPQ9NYB0 399 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 EXOC6BQ9Y2D4 811 aa3.18□□□□□ -1.9
UBE2D3-225ENST00000508476 DKC1O60832 514 aaKnown RBP eCLIP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 LETM1O95202 739 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 APOA4P06727 396 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 EZRP15311 586 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 GDF1P27539 372 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 CCND3P30281 292 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 CXCL6P80162 114 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 PSMD6Q15008 389 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 C14orf28Q4W4Y0 310 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 C9orf129Q5T035 196 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 CASC4Q6P4E1 433 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 ALKBH5Q6P6C2 394 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 WDR49Q8IV35 697 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 CNPY4Q8N129 248 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 OR1K1Q8NGR3 316 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 TBCKQ8TEA7 893 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 MRPL24Q96A35 216 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 PCED1BQ96HM7 432 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 RASL10BQ96S79 203 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 MAPKAP1Q9BPZ7 522 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 GPR173Q9NS66 373 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 VNN3Q9NY84 501 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 CFDP1Q9UEE9 299 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 OR1A2Q9Y585 309 aa3.17□□□□□ -1.9
UBE2D3-225ENST00000508476 TDRD6O60522 2096 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 TRAV34A0A0B4J273 112 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 CCT8L1PA6NM43 557 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 YDJCA8MPS7 323 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 H7C0S8 307 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 SIX3O95343 332 aaPredicted RBP3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 TSPY3P0CV98 308 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 TSPY8P0CW00 308 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 GLRA1P23415 457 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 GP5P40197 560 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 PAX2Q02962 417 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 IQCCQ4KMZ1 466 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 DCAF12Q5T6F0 453 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 AQP12AQ8IXF9 295 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 CCDC197Q8NCU1 140 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 CKAP2Q8WWK9 683 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 RAB3CQ96E17 227 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 RBM18Q96H35 190 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 RAB40CQ96S21 281 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 SERINC2Q96SA4 455 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 BAG1Q99933 345 aaPredicted RBP3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 CXXC4Q9H2H0 198 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 IL1RL2Q9HB29 575 aa3.16□□□□□ -1.9
UBE2D3-225ENST00000508476 ATP6AP2A0A1C7CYW4 349 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 NME6O75414 186 aaPredicted RBP3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 CSDE1O75534 798 aaKnown RBP3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 FCGR3AP08637 254 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 MGMTP16455 207 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 MTIF2P46199 727 aaKnown RBP3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 IER3P46695 156 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 RGRP47804 291 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 GSTO1P78417 241 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 AKAP17AQ02040 695 aaKnown RBP3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 SLC3A1Q07837 685 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 EIF4EBP2Q13542 120 aaPredicted RBP3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 TGIF1Q15583 401 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 ABRAXAS1Q6UWZ7 409 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 C4orf19Q8IY42 314 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 CCDC89Q8N998 374 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 CHDHQ8NE62 594 aaPredicted RBP3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 BEST4Q8NFU0 473 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 CORO2AQ92828 525 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 PNPLA2Q96AD5 504 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 C17orf62Q9BQA9 187 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 ZNF559Q9BR84 538 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 PAXXQ9BUH6 204 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 IDI2Q9BXS1 227 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 AMBNQ9NP70 447 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 SLCO1C1Q9NYB5 712 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 PLEK2Q9NYT0 353 aa3.15□□□□□ -1.91
UBE2D3-225ENST00000508476 TAS2R16Q9NYV7 291 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms