RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 BNC1Q01954 994 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 EXOSC2Q13868 293 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 IL18Q14116 193 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 EXOSC7Q15024 291 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 WDR43Q15061 677 aaKnown RBP eCLIP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 CTF1Q16619 201 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 ZSWIM7Q19AV6 140 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 HKDC1Q2TB90 917 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 HIKESHIQ53FT3 197 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 FSCBQ5H9T9 825 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 KCNV1Q6PIU1 500 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 ZNF841Q6ZN19 808 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 DEF8Q6ZN54 512 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 FAM57BQ71RH2 274 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 C16orf62Q7Z3J2 963 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 ZC3H3Q8IXZ2 948 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 KATNAL2Q8IYT4 538 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 TMEM123Q8N131 208 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 CPSF7Q8N684 471 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 KLHDC1Q8N7A1 406 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 PNLDC1Q8NA58 520 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 ADAD2Q8NCV1 583 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 ZNF397Q8NF99 534 aaPredicted RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 OR14A16Q8NHC5 309 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 OLIG1Q8TAK6 271 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 OSR1Q8TAX0 266 aaPredicted RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 GIPC3Q8TF64 312 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 CACTINQ8WUQ7 758 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 TSACCQ96A04 125 aaPredicted RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 NRBF2Q96F24 287 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 TMEM19Q96HH6 336 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 APOLD1Q96LR9 279 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 GFM1Q96RP9 751 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 GAL3ST1Q99999 423 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 CHRDL1Q9BU40 450 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 MLST8Q9BVC4 326 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 SSBP3Q9BWW4 388 aaPredicted RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 RBM24Q9BX46 236 aaKnown RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 GANQ9H2C0 597 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 TLE6Q9H808 572 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 THSD1Q9NS62 852 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 ZNF701Q9NV72 531 aaPredicted RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 UBAP1Q9NZ09 502 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 SEC14L3Q9UDX4 400 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 LCMT1Q9UIC8 334 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 PILRAQ9UKJ1 303 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 ERVK-19Q9WJR5 959 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 YIPF1Q9Y548 306 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 TROQ12816 1431 aaPredicted RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 KIAA1107Q9UPP5 1409 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 CENPJQ9HC77 1338 aaPredicted RBP3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 UBR1Q8IWV7 1749 aa3.67□□□□□ -1.82
ATP2C1-213ENST00000508297 BRWD3Q6RI45 1802 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 A0A087WUV0 522 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 A0A0G2JK05 382 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 FAM240BA0A1B0GVZ2 78 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 SH3PXD2BA1X283 911 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 C5orf60A6NFR6 353 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 TCP11X1B4DZS4 312 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 I6L893 689 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 GAPDHSO14556 408 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 MGST3O14880 152 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CETN3O15182 167 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 RRP8O43159 456 aaKnown RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 MLNRO43193 412 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 ZSCAN12O43309 604 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CIDEAO60543 219 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 ZNF623O75123 536 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 MTRF1O75570 445 aaKnown RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 POP4O95707 220 aaKnown RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CALCAP01258 141 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CRYGCP07315 174 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CD59P13987 128 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 ACRV1P26436 265 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 NF2P35240 595 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 LONP1P36776 959 aaKnown RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 FDFT1P37268 417 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 MPLP40238 635 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CRYBB1P53674 252 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 MAZP56270 477 aaKnown RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CX3CL1P78423 397 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 NHLH1Q02575 133 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 EEF1A2Q05639 463 aaKnown RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 FGL1Q08830 312 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 ST3GAL1Q11201 340 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 HEPACAMQ14CZ8 416 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 SSX2Q16385 188 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 CLPPQ16740 277 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 TMEM44Q2T9K0 475 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 KLHL40Q2TBA0 621 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 LINC01620Q4KN68 170 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 XKR3Q5GH77 459 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 PPP6R3Q5H9R7 873 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 HIST2H2AA3Q6FI13 130 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 OR4A47Q6IF82 309 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 BZW1Q7L1Q6 419 aaKnown RBP3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 TRPM8Q7Z2W7 1104 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 PRUNE1Q86TP1 453 aa3.66□□□□□ -1.82
ATP2C1-213ENST00000508297 SLC22A16Q86VW1 577 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms