RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 ZNF791Q3KP31 576 aaPredicted RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 PIGGQ5H8A4 983 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 ZNF470Q6ECI4 717 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 LUZP2Q86TE4 346 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 PPIL6Q8IXY8 311 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 ZNF595Q8IYB9 648 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 MBD3L2Q8NHZ7 208 aaPredicted RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 KIF18AQ8NI77 898 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 PAQR8Q8TEZ7 354 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 SLC5A11Q8WWX8 675 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 FAR2Q96K12 515 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 OR4K3Q96R72 315 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 NPLQ9BXD5 320 aaPredicted RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 GSX2Q9BZM3 304 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 PRDM14Q9GZV8 571 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 AICDAQ9GZX7 198 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 ARID1AO14497 2285 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 A0A0G2JN53 185 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 SYNDIG1LA6NDD5 238 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 FAM187AA6NFU0 413 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 SERPINA6P08185 405 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 HIST1H2AGP0C0S8 130 aaPredicted RBP12.73□□□□□ -0.37
DDR1-260ENST00000507533 TMIGD3P0DMS9 266 aaPredicted RBP12.73□□□□□ -0.37
DDR1-260ENST00000507533 MLNP12872 115 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 NID1P14543 1247 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 PAMP19021 973 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 HIST1H2ADP20671 130 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 IVDP26440 423 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 GDF1P27539 372 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 PTH2RP49190 550 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 REEP5Q00765 189 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 DHX9Q08211 1270 aaKnown RBP12.73□□□□□ -0.37
DDR1-260ENST00000507533 DMTNQ08495 405 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 MPEG1Q2M385 716 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 RNASEH2BQ5TBB1 312 aaKnown RBP12.73□□□□□ -0.37
DDR1-260ENST00000507533 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 CAND1Q86VP6 1230 aaKnown RBP12.73□□□□□ -0.37
DDR1-260ENST00000507533 DENND6AQ8IWF6 608 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDR1-260ENST00000507533 NAT8LQ8N9F0 302 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 OR56A3Q8NH54 315 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 SLC2A12Q8TD20 617 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 EEF1AKMT1Q8WVE0 214 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 NEIL2Q969S2 332 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 HIST1H2AHQ96KK5 128 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 HIST1H2AJQ99878 128 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 H2AFJQ9BTM1 129 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 ALOXE3Q9BYJ1 711 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 CALHM2Q9HA72 323 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 PROK2Q9HC23 129 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 XAB2Q9HCS7 855 aaKnown RBP12.73□□□□□ -0.37
DDR1-260ENST00000507533 VTI1BQ9UEU0 232 aa12.73□□□□□ -0.37
DDR1-260ENST00000507533 CHD3Q12873 2000 aaKnown RBP12.72□□□□□ -0.37
DDR1-260ENST00000507533 C17orf105B2RV13 164 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 CTNSO60931 367 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 C1QAP02745 245 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 STX4Q12846 297 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 FOXF2Q12947 444 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 SP140Q13342 867 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 THOC5Q13769 683 aaKnown RBP12.72□□□□□ -0.37
DDR1-260ENST00000507533 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 LRRC8EQ6NSJ5 796 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 CASC4Q6P4E1 433 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 C20orf204Q6ZNR8 217 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 C9orf106Q8NAJ2 232 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 SLC22A8Q8TCC7 542 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 SPACA9Q96E40 222 aaPredicted RBP12.72□□□□□ -0.37
DDR1-260ENST00000507533 PIK3IP1Q96FE7 263 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 TSNARE1Q96NA8 513 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 SERPINB12Q96P63 405 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 AIF1LQ9BQI0 150 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 CNIH4Q9P003 139 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 TRMT6Q9UJA5 497 aaKnown RBP12.72□□□□□ -0.37
DDR1-260ENST00000507533 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 COMMD10Q9Y6G5 202 aa12.72□□□□□ -0.37
DDR1-260ENST00000507533 EML6Q6ZMW3 1958 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 KIAA1549Q9HCM3 1950 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 EFCAB8A8MWE9 144 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 DEFB108AA8MXU0 73 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 GOLGA8MH3BSY2 632 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 SIAH2O43255 324 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.37
DDR1-260ENST00000507533 RAD51CO43502 376 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 B3GALT2O43825 422 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 LRATO95237 230 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 ACSL3O95573 720 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 RGS4P49798 205 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 STXBP1P61764 594 aaKnown RBP12.71□□□□□ -0.37
DDR1-260ENST00000507533 VASNQ6EMK4 673 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 LYPD8Q6UX82 237 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 MYO1HQ8N1T3 1032 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 GPATCH11Q8N954 259 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 FAM13CQ8NE31 585 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.37
DDR1-260ENST00000507533 GAL3ST3Q96A11 431 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 NTNG2Q96CW9 530 aa12.71□□□□□ -0.37
DDR1-260ENST00000507533 WDYHV1Q96HA8 205 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms