RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 CLCA3PQ9Y6N3 262 aa12.66□□□□□ -0.38
PDCD6-204ENST00000506909 TRAV17A0A0B4J275 112 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 ARHGAP10A1A4S6 786 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 CTIFO43310 598 aaKnown RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 TYROBPO43914 113 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 GUCY1B2O75343 617 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 GPR75O95800 540 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 AIFM1O95831 613 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 GBAP04062 536 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 KLK1P06870 262 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 NR2F6P10588 404 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 FOLH1Q04609 750 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 IGFBP7Q16270 282 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 HOMEZQ8IX15 550 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 BEST3Q8N1M1 668 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 OR1N1Q8NGS0 311 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 CHTF18Q8WVB6 975 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 NCLNQ969V3 563 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 SNRNP40Q96DI7 357 aaKnown RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 ZIM3Q96PE6 472 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 FAM111AQ96PZ2 611 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 KCNA7Q96RP8 456 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 HBEGFQ99075 208 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 BARD1Q99728 777 aaKnown RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 TRMOQ9BU70 441 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 DEFB126Q9BYW3 111 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 CDCP1Q9H5V8 836 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 TEX10Q9NXF1 929 aaPredicted RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 SLC17A7Q9P2U7 560 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 ZNF223Q9UK11 482 aaPredicted RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 TIMM22Q9Y584 194 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 PCDHGB6Q9Y5F9 930 aa12.65□□□□□ -0.38
PDCD6-204ENST00000506909 COPG1Q9Y678 874 aaKnown RBP12.65□□□□□ -0.38
PDCD6-204ENST00000506909 TEP1Q99973 2627 aaKnown RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 C17orf105B2RV13 164 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 PYCARD-AS1I3L0S3 204 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 RGS16O15492 202 aaPredicted RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 MAN1A2O60476 641 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 SPAG7O75391 227 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 ERLIN1O75477 346 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 PRKRAO75569 313 aaKnown RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 COX7A2P14406 83 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 CREB1P16220 341 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 TNNI3P19429 210 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 ALDH3A1P30838 453 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 STT3AP46977 705 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 HTR6P50406 440 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 MAPK12P53778 367 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 FOXA1P55317 472 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 MLF1P58340 268 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 TRA2BP62995 288 aaKnown RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 ID2Q02363 134 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 KCNC4Q03721 635 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 PRR30Q53SZ7 412 aaPredicted RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 TNFAIP8L3Q5GJ75 292 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 NDUFAF5Q5TEU4 345 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 FAM219BQ5XKK7 198 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 OR52E8Q6IFG1 317 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 ATCAYQ86WG3 371 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 OR4N5Q8IXE1 308 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 ST13P4Q8IZP2 240 aaPredicted RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 C1orf52Q8N6N3 182 aaKnown RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 GALNT11Q8NCW6 608 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 DGAT2Q96PD7 388 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 PELOQ9BRX2 385 aaKnown RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 ACPTQ9BZG2 426 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■□□ 18.9
PDCD6-204ENST00000506909 SSU72Q9NP77 194 aaKnown RBP12.64□□□□□ -0.39
PDCD6-204ENST00000506909 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
PDCD6-204ENST00000506909 TRBV11-1A0A0K0K1C0 115 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 MYOCOSA0A1B0GUC4 107 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 C1orf226A1L170 272 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 GLOD5A6NK44 160 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 WASHC1A8K0Z3 465 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 GABRR3A8MPY1 467 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 FCHO1O14526 889 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 PGRMC2O15173 223 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 ZFAND5O76080 213 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 DDAH2O95865 285 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 F10P00742 488 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 UROSP10746 265 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 CHN1P15882 459 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 ALOX15P16050 662 aaPredicted RBP12.63□□□□□ -0.39
PDCD6-204ENST00000506909 GALNSP34059 522 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 CD96P40200 585 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 PLIN5Q00G26 463 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 SRSF1Q07955 248 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDCD6-204ENST00000506909 TUBA3CQ13748 450 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 INAQ16352 499 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 SPIN4Q56A73 249 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 CEP85LQ5SZL2 805 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 GALNT18Q6P9A2 607 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 TUBA3EQ6PEY2 450 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 LRIG3Q6UXM1 1119 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 TRIM46Q7Z4K8 759 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 EXOC3L1Q86VI1 746 aa12.63□□□□□ -0.39
PDCD6-204ENST00000506909 MDS2Q8NDY4 140 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms