RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 H3F3CQ6NXT2 135 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 FAM199XQ6PEV8 388 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 KIRREL2Q6UWL6 708 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 IGFL3Q6UXB1 125 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ZCCHC23Q6ZST2 131 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 PPP1R32Q7Z5V6 425 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ANKRD37Q7Z713 158 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 DDIASQ8IXT1 998 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 SLC15A4Q8N697 577 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 EFCAB3Q8N7B9 438 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF781Q8N8C0 355 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 VPS37AQ8NEZ2 397 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 OR5L2Q8NGL0 311 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 DNAJB8Q8NHS0 232 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TSPEARQ8WU66 669 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TESCQ96BS2 214 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 MOAP1Q96BY2 351 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TM4SF18Q96CE8 201 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TUBGCP3Q96CW5 907 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 DTNBP1Q96EV8 351 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ZBED6CLQ96FA7 236 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 VMP1Q96GC9 406 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 IMMP1LQ96LU5 166 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 PTCHD1Q96NR3 888 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 CNTNAP3BQ96NU0 1288 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 YIPF2Q9BWQ6 316 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 MRPL1Q9BYD6 325 aaKnown RBP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TRIM55Q9BYV6 548 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 CNTNAP3Q9BZ76 1288 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 SEMA4CQ9C0C4 833 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 LHPPQ9H008 270 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 C12orf65Q9H3J6 166 aaKnown RBP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 NEUROD4Q9HD90 331 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 MLXIPLQ9NP71 852 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 MIEF1Q9NQG6 463 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ACSS2Q9NR19 701 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 FARSBQ9NSD9 589 aaKnown RBP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 HCN3Q9P1Z3 774 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ABI3Q9P2A4 366 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 COPS7AQ9UBW8 275 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 PRDM4Q9UKN5 801 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TRIM33Q9UPN9 1127 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF451Q9Y4E5 1061 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 KCNMB2Q9Y691 235 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 CLCA3PQ9Y6N3 262 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 MGAQ8IWI9 3026 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 NUP214P35658 2090 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 LOC400499M0QZD8 3231 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 A0A1W2PR48 441 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 WDR91A4D1P6 747 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 C4orf51C9J302 202 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 PLOD2O00469 737 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 SLC22A2O15244 555 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 TMPRSS11DO60235 418 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CNOT3O75175 753 aaKnown RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 EEDO75530 441 aaKnown RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 AIFM1O95831 613 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 COX6A1P12074 109 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 PORP16435 677 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 TSPAN8P19075 237 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 NTSP30990 170 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 MDH1P40925 334 aaKnown RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 FRKP42685 505 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CLCN2P51788 898 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 HNRNPH2P55795 449 aaKnown RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CLDN8P56748 225 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 OR4D2P58180 307 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 DCAF7P61962 342 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 BTKQ06187 659 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 MAP4K2Q12851 820 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 IL10RAQ13651 578 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 INAQ16352 499 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CLEC6AQ6EIG7 209 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 LCN10Q6JVE6 187 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ZCCHC12Q6PEW1 402 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 BHLHB9Q6PI77 547 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 IGFL2Q6UWQ7 119 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 LARP4Q71RC2 724 aaKnown RBP eCLIP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 RPS27LQ71UM5 84 aaKnown RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 PRSS41Q7RTY9 318 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CLNKQ7Z7G1 428 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 LRRC25Q8N386 305 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 SLC5A8Q8N695 610 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 HORMAD2Q8N7B1 307 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 FNDC5Q8NAU1 212 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 B3GNT7Q8NFL0 401 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 OR8J2Q8NGG1 315 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 PSMA8Q8TAA3 256 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 NUBPLQ8TB37 319 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 C16orf78Q8WTQ4 265 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 OIT3Q8WWZ8 545 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 FBXL20Q96IG2 436 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF354BQ96LW1 612 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 DGAT2Q96PD7 388 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 SMAD5Q99717 465 aaKnown RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 MAPKAP1Q9BPZ7 522 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ALOXE3Q9BYJ1 711 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 BRINP2Q9C0B6 783 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 BHLHE41Q9C0J9 482 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms