RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MMP12P39900 470 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 CASP3P42574 277 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 KIAA1024LP59773 190 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 BTG1P62324 171 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 ACTN3Q08043 901 aaPredicted RBP5.11□□□□□ -1.59
HERC4-213ENST00000506515 MTF1Q14872 753 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 TAB1Q15750 504 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 SGCBQ16585 318 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 HLA-BQ31612 363 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 ATP1A1-AS1Q5TC04 95 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 C17orf107Q6ZR85 190 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 Q6ZTC4 211 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 C15orf52Q6ZUT6 534 aaKnown RBP5.11□□□□□ -1.59
HERC4-213ENST00000506515 CHMP1BQ7LBR1 199 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 BHLHA9Q7RTU4 235 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 SFRP1Q8N474 314 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 SEPT8Q92599 483 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 SNX21Q969T3 373 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 OMA1Q96E52 524 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 FAM218AQ96MZ4 157 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 IL12RB2Q99665 862 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 SYT15Q9BQS2 421 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 MRPL9Q9BYD2 267 aaKnown RBP5.11□□□□□ -1.59
HERC4-213ENST00000506515 MTIF3Q9H2K0 278 aaKnown RBP5.11□□□□□ -1.59
HERC4-213ENST00000506515 DBNDD1Q9H9R9 158 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 TXLNGQ9NUQ3 528 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 TMEM181Q9P2C4 612 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 KLHL8Q9P2G9 620 aaPredicted RBP5.11□□□□□ -1.59
HERC4-213ENST00000506515 SNED1Q8TER0 1413 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 NUP98P52948 1817 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 TRIOBPQ9H2D6 2365 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 CUL9Q8IWT3 2517 aa5.11□□□□□ -1.59
HERC4-213ENST00000506515 C2orf92A0A1B0GVN3 265 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 FAM149AA5PLN7 773 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 M0R296 226 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 ZNF609O15014 1411 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 ZNF821O75541 412 aaPredicted RBP5.1□□□□□ -1.59
HERC4-213ENST00000506515 COL6A3P12111 3177 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 CPA3P15088 417 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 CTNNA2P26232 953 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 SLC1A3P43003 542 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 ATP12AP54707 1039 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 SLC3A1Q07837 685 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 RPA4Q13156 261 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 RPS6KA1Q15418 735 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 C2orf76Q3KRA6 126 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 CCDC152Q4G0S7 254 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 FAM106AQ4KMX7 169 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 AARDQ4LEZ3 155 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 KCTD11Q693B1 232 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 SLC27A4Q6P1M0 643 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 Q6ZRP5 223 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 THEM5Q8N1Q8 247 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 TEX26Q8N6G2 289 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 CCDC185Q8N715 623 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 ADAD2Q8NCV1 583 aaKnown RBP5.1□□□□□ -1.59
HERC4-213ENST00000506515 OR5T2Q8NGG2 359 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 HCAR2Q8TDS4 363 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 FAM46BQ96A09 425 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 PDLIM5Q96HC4 596 aaKnown RBP5.1□□□□□ -1.59
HERC4-213ENST00000506515 ART5Q96L15 291 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 ACAT2Q9BWD1 397 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 PAPPA2Q9BXP8 1791 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 COA1Q9GZY4 146 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 C3orf14Q9HBI5 128 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 MID1IP1Q9NPA3 183 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 DBF4Q9UBU7 674 aaPredicted RBP5.1□□□□□ -1.59
HERC4-213ENST00000506515 ZNF510Q9Y2H8 683 aa5.1□□□□□ -1.59
HERC4-213ENST00000506515 CACNB4O00305 520 aaPredicted RBP5.09□□□□□ -1.59
HERC4-213ENST00000506515 KERAO60938 352 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 KRT3P12035 628 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 HLA-FP30511 346 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 TSFMP43897 325 aaKnown RBP5.09□□□□□ -1.59
HERC4-213ENST00000506515 SMSP52788 366 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 AP1B1Q10567 949 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 MAPK11Q15759 364 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 CES4AQ5XG92 561 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 COPS6Q7L5N1 327 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 TMEM126BQ8IUX1 230 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 TMEM99Q8N816 258 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 OR4D10Q8NGI6 311 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 PSMA8Q8TAA3 256 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 BCL2L2Q92843 193 aaPredicted RBP5.09□□□□□ -1.59
HERC4-213ENST00000506515 CASP10Q92851 521 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 EPSTI1Q96J88 318 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 DEFB129Q9H1M3 183 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 HYPKQ9NX55 129 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 CSNK1G3Q9Y6M4 447 aa5.09□□□□□ -1.59
HERC4-213ENST00000506515 SZT2Q5T011 3432 aa5.09□□□□□ -1.6
HERC4-213ENST00000506515 COL1A1P02452 1464 aaPredicted RBP5.08□□□□□ -1.6
HERC4-213ENST00000506515 NEDD4P46934 1319 aa5.08□□□□□ -1.6
HERC4-213ENST00000506515 UBN2Q6ZU65 1347 aa5.08□□□□□ -1.6
HERC4-213ENST00000506515 C5orf51A6NDU8 294 aa5.08□□□□□ -1.6
HERC4-213ENST00000506515 SURF4O15260 269 aa5.08□□□□□ -1.6
HERC4-213ENST00000506515 UFL1O94874 794 aa5.08□□□□□ -1.6
HERC4-213ENST00000506515 EIF2S2P20042 333 aaKnown RBP5.08□□□□□ -1.6
HERC4-213ENST00000506515 NPRL3Q12980 569 aa5.08□□□□□ -1.6
HERC4-213ENST00000506515 DRP2Q13474 957 aa5.08□□□□□ -1.6
HERC4-213ENST00000506515 GRB14Q14449 540 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms