RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 POLE3Q9NRF9 147 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 INTS9Q9NV88 658 aaKnown RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 PSORS1C1Q9UIG5 152 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SH3BGRL2Q9UJC5 107 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 PILRBQ9UKJ0 227 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 BLOC1S6Q9UL45 172 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 TMCC3Q9ULS5 477 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 EXOC7Q9UPT5 735 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SATB2Q9UPW6 733 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 AURKCQ9UQB9 309 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 NUDCQ9Y266 331 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 PLEKHA6Q9Y2H5 1048 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ATP6V0A2Q9Y487 856 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ABCC4O15439 1325 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ATP8B3O60423 1300 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 UBE4BO95155 1302 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 MAP3K15Q6ZN16 1313 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CACNA1SQ13698 1873 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 NPC1L1Q9UHC9 1359 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 DUOX1Q9NRD9 1551 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 MTMR11A4FU01 709 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF732B4DXR9 585 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CHUKO15111 745 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CIDEAO60543 219 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CYTIPO60759 359 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 NOL3O60936 208 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 STBD1O95210 358 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 EPOP01588 193 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CRYAAP02489 173 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CXCL10P02778 98 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 HEXBP07686 556 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 FGF3P11487 239 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 KRT5P13647 590 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 PLA2G2AP14555 144 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ANPEPP15144 967 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ITGB6P18564 788 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ITGA3P26006 1051 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCND2P30279 289 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC6A12P48065 614 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TNFSF10P50591 281 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF131P52739 623 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 KCNK10P57789 538 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 NANOS2P60321 138 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 KCNJ10P78508 379 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 GABPAQ06546 454 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ILF3Q12906 894 aaKnown RBP eCLIP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CEACAM7Q14002 265 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 DPYSQ14117 519 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 KRT31Q15323 416 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 SPHARQ15513 63 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 EXT1Q16394 746 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CARTPTQ16568 116 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 HERC4Q5GLZ8 1057 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TEX35Q5T0J7 233 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 PRAMEF7Q5VXH5 474 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CST9Q5W186 159 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 WBP2NLQ6ICG8 309 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 SNRNP48Q6IEG0 339 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR4C11Q6IEV9 310 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TCEAL6Q6IPX3 200 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 RFPL4BQ6ZWI9 263 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CYP4V2Q6ZWL3 525 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRMT11Q7Z4G4 463 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 C5orf24Q7Z6I8 188 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRPT1Q86TN4 253 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCDC185Q8N715 623 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 STPG4Q8N801 248 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TCEANCQ8N8B7 351 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZBTB44Q8NCP5 570 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 KLHDC9Q8NEP7 349 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRPV3Q8NET8 790 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPRC5AQ8NFJ5 357 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR4C3Q8NH37 302 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 SCARB1Q8WTV0 552 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 UBTD2Q8WUN7 234 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 HPSE2Q8WWQ2 592 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 FCAMRQ8WWV6 532 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 SUSD6Q92537 303 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ESAMQ96AP7 390 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 MRPL38Q96DV4 380 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 C14orf79Q96F83 325 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 CAPNS2Q96L46 248 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 TSGA13Q96PP4 275 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 IL12RB2Q99665 862 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 NKX3-1Q99801 234 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 RAB17Q9H0T7 212 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 THAP2Q9H0W7 228 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 HOMER3Q9NSC5 361 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 ACOXLQ9NUZ1 547 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 RNF186Q9NXI6 227 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 HACD3Q9P035 362 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 NDUFA13Q9P0J0 144 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 FAM153AQ9UHL3 310 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 MRPS2Q9Y399 296 aaKnown RBP2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 SBF1O95248 1867 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 FAM205AQ6ZU69 1335 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 MAPK8IP3Q9UPT6 1336 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 LAMB4A4D0S4 1761 aa2.87□□□□□ -1.95
TRAPPC11-205ENST00000506426 THSD7BQ9C0I4 1608 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 FER1L6Q2WGJ9 1857 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms