RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 R3HCC1LQ7Z5L2 792 aaKnown RBP18.9■□□□□ 0.62
SMIM20-201ENST00000506197 ZNF595Q8IYB9 648 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 PRSS58Q8IYP2 241 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 IL22RA1Q8N6P7 574 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 STARD8Q92502 1023 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 TTC9Q92623 222 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 ZBTB18Q99592 522 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 REEP4Q9H6H4 257 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 WDR54Q9H977 334 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 PSME2Q9UL46 239 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 PCDHA9Q9Y5H5 950 aa18.9■□□□□ 0.62
SMIM20-201ENST00000506197 BOD1L1Q8NFC6 3051 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 PRKRAO75569 313 aaKnown RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 CDC123O75794 336 aaPredicted RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 RAB40ALP0C0E4 278 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 ZGLP1P0C6A0 271 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 DDCP20711 480 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 PPP2R1BP30154 601 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 DLSTP36957 453 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 CLNS1AP54105 237 aaKnown RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 CLDN8P56748 225 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 RPS15P62841 145 aaKnown RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 CBX1P83916 185 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 MC1RQ01726 317 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 ACTN3Q08043 901 aaPredicted RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 SLC13A2Q13183 592 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 ERV3-1Q14264 604 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 NKG7Q16617 165 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 MRPL14Q6P1L8 145 aaKnown RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 CLNKQ7Z7G1 428 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 CCDC197Q8NCU1 140 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.89■□□□□ 0.614e-6■■■■□ 24.9
SMIM20-201ENST00000506197 TANKQ92844 425 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 WBP1Q96G27 269 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 PRPF18Q99633 342 aaKnown RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 SOX17Q9H6I2 414 aaPredicted RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 PRDM9Q9NQV7 894 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 PRTFDC1Q9NRG1 225 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 ZIM2Q9NZV7 527 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 CROTQ9UKG9 612 aa18.89■□□□□ 0.61
SMIM20-201ENST00000506197 COPG1Q9Y678 874 aaKnown RBP18.89■□□□□ 0.61
SMIM20-201ENST00000506197 GLOD5A6NK44 160 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 VSTM2BA6NLU5 285 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 C21orf140B9A014 251 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 SCAMP2O15127 329 aaKnown RBP18.88■□□□□ 0.61
SMIM20-201ENST00000506197 CCDC22O60826 627 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 JRKO75564 520 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 HNRNPFP52597 415 aaKnown RBP18.88■□□□□ 0.61
SMIM20-201ENST00000506197 SRSF6Q13247 344 aaKnown RBP18.88■□□□□ 0.61
SMIM20-201ENST00000506197 DNASE1L3Q13609 305 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 SLC48A1Q6P1K1 146 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 SHISA6Q6ZSJ9 500 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 SHISA5Q8N114 240 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 MMP21Q8N119 569 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 KRTCAP2Q8N6L1 136 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 ENDOVQ8N8Q3 282 aaKnown RBP18.88■□□□□ 0.61
SMIM20-201ENST00000506197 ANKS4BQ8N8V4 417 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 NKD1Q969G9 470 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 KIAA1143Q96AT1 154 aaPredicted RBP18.88■□□□□ 0.61
SMIM20-201ENST00000506197 PPCDCQ96CD2 204 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 MTERF3Q96E29 417 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 FAM117AQ9C073 453 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 SDR39U1Q9NRG7 319 aaPredicted RBP18.88■□□□□ 0.61
SMIM20-201ENST00000506197 LANCL2Q9NS86 450 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 EHD3Q9NZN3 535 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 MKL2Q9ULH7 1088 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 PTRH2Q9Y3E5 179 aaKnown RBP18.88■□□□□ 0.61
SMIM20-201ENST00000506197 MMACHCQ9Y4U1 282 aa18.88■□□□□ 0.61
SMIM20-201ENST00000506197 PGRMC2O15173 223 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 EFSO43281 561 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 SLC22A3O75751 556 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 SPTA1P02549 2419 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 HEXBP07686 556 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 FURINP09958 794 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 COX7A2P14406 83 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 FOLR3P41439 243 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 MRPL19P49406 292 aaKnown RBP18.87■□□□□ 0.61
SMIM20-201ENST00000506197 HSD17B7P56937 341 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 C21orf58P58505 322 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 UFM1P61960 85 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 QSOX2Q6ZRP7 698 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 MED25Q71SY5 747 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 VASH2Q86V25 355 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 DTX1Q86Y01 620 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 TICAM1Q8IUC6 712 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 ZNF843Q8N446 348 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 TMEM52Q8NDY8 209 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 KLHL29Q96CT2 875 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 CRB3Q9BUF7 120 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 GIMAP4Q9NUV9 329 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 ATAD3AQ9NVI7 634 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 SH3BP4Q9P0V3 963 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 UTS2RQ9UKP6 389 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 ENTPD4Q9Y227 616 aa18.87■□□□□ 0.61
SMIM20-201ENST00000506197 FARSAQ9Y285 508 aaKnown RBP18.87■□□□□ 0.61
SMIM20-201ENST00000506197 LOC101059948A0A1B0GTJ6 334 aa18.86■□□□□ 0.61
SMIM20-201ENST00000506197 ANKRD28O15084 1053 aa18.86■□□□□ 0.61
SMIM20-201ENST00000506197 CTNSO60931 367 aa18.86■□□□□ 0.61
SMIM20-201ENST00000506197 DCTN3O75935 186 aa18.86■□□□□ 0.61
SMIM20-201ENST00000506197 GPX3P22352 226 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms