RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ASPHQ12797 758 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 CALCOCO2Q13137 446 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 PIGGQ5H8A4 983 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 CAMKMTQ7Z624 323 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 CTAGE6Q86UF2 777 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 KIF18BQ86Y91 864 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 KLHL7Q8IXQ5 586 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 ZBED8Q8IZ13 594 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 RPRMLQ8N4K4 120 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 PDPRQ8NCN5 879 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 FAM13CQ8NE31 585 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 STAG3L4Q8TBR4 150 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 PYROXD1Q8WU10 500 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 ANKRD49Q8WVL7 239 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 REPS1Q96D71 796 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 SPACA9Q96E40 222 aaPredicted RBP19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 FBXL20Q96IG2 436 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 CPNE1Q99829 537 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 CLEC4MQ9H2X3 399 aaPredicted RBP19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 RPF2Q9H7B2 306 aaKnown RBP19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 TUBA8Q9NY65 449 aaPredicted RBP19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 MOCS1Q9NZB8 636 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 OPTCQ9UBM4 332 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 ANGPTL3Q9Y5C1 460 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 PSAT1Q9Y617 370 aa19.43■□□□□ 0.7
SQSTM1-210ENST00000506042 CSMD2Q7Z408 3487 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 A0A0G2JNJ9 132 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 OR6C76A6NM76 312 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 EFCAB8A8MWE9 144 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 KRT38O76015 456 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 SEC31AO94979 1220 aaKnown RBP19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 UQCRC1P31930 480 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 ASCL1P50553 236 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 IST1P53990 364 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 HLA-DQA1Q5Y7H0 255 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 TMEM198Q66K66 360 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 RNF111Q6ZNA4 994 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 MAATS1Q7Z4T9 603 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 RGMAQ96B86 450 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 DTNBP1Q96EV8 351 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 HSPBAP1Q96EW2 488 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 SENP5Q96HI0 755 aaPredicted RBP19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 CAPZA3Q96KX2 299 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 ZNF597Q96LX8 424 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 MS4A8Q9BY19 250 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 CD244Q9BZW8 370 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 ACKR4Q9NPB9 350 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 Q9UFV3 132 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 L3MBTL1Q9Y468 752 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 CLDN16Q9Y5I7 305 aa19.42■□□□□ 0.7
SQSTM1-210ENST00000506042 TACC2O95359 2948 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 AHRRA9YTQ3 701 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 CDH16O75309 829 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 SCELO95171 688 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 GOSR1O95249 250 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 IL2RAP01589 272 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 CCL3P10147 92 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 IVDP26440 423 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 CASP2P42575 452 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 DGKQP52824 942 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 RAPH1Q70E73 1250 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 TBC1D1Q86TI0 1168 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 TGIF2LYQ8IUE0 185 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 ZZZ3Q8IYH5 903 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 ST13P4Q8IZP2 240 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 PAQR8Q8TEZ7 354 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 ZNF721Q8TF20 911 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 FAM222BQ8WU58 562 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 JSRP1Q96MG2 331 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 MAPKAP1Q9BPZ7 522 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 TMEM79Q9BSE2 394 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 DOHHQ9BU89 302 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 NUDT4Q9NZJ9 180 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 ST6GALNAC2Q9UJ37 374 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 ZNF490Q9ULM2 529 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 FAM215AQ9Y5M1 114 aa19.41■□□□□ 0.7
SQSTM1-210ENST00000506042 SYCE1LA8MT33 242 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 CTAG2O75638 210 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 ALOX15P16050 662 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 EPB42P16452 691 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 SPRP35270 261 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 GP5P40197 560 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 NRG3P56975 720 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 FOXO1Q12778 655 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 SLAMF1Q13291 335 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 C18orf21Q32NC0 220 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 KHDRBS2Q5VWX1 349 aaKnown RBP19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 OR4C11Q6IEV9 310 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 GPR180Q86V85 440 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 LACC1Q8IV20 430 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 NEIL3Q8TAT5 605 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 EXT2Q93063 718 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 GAL3ST4Q96RP7 486 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 CNPPD1Q9BV87 410 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 TRIM31Q9BZY9 425 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 ZNF703Q9H7S9 590 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 NMRAL1Q9HBL8 299 aa19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 LYARQ9NX58 379 aaKnown RBP19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 PTBP2Q9UKA9 531 aaKnown RBP19.4■□□□□ 0.7
SQSTM1-210ENST00000506042 PCDHGA11Q9Y5H2 935 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms