RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SLC48A1Q6P1K1 146 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 BHLHB9Q6PI77 547 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 ENPP6Q6UWR7 440 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 TMEM64Q6YI46 380 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 CCDC80Q76M96 950 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SFTPA2Q8IWL1 248 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SAMD14Q8IZD0 417 aaPredicted RBP7.62□□□□□ -1.19
COL4A5-208ENST00000505728 MMP21Q8N119 569 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 GALNT4Q8N4A0 578 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 MARVELD2Q8N4S9 558 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 METTL25Q8N6Q8 603 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 KCT2Q8NC54 265 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 FAM110BQ8TC76 370 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SFXN5Q8TD22 340 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 GATA6Q92908 595 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 MOAP1Q96BY2 351 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 TBC1D20Q96BZ9 403 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 TRAPPC9Q96Q05 1148 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SLC38A3Q99624 504 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 CIB1Q99828 191 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 MAPKAP1Q9BPZ7 522 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 MACROD1Q9BQ69 325 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 DPH2Q9BQC3 489 aaPredicted RBP7.62□□□□□ -1.19
COL4A5-208ENST00000505728 ASPSCR1Q9BZE9 553 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 RAB33BQ9H082 229 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 CXorf36Q9H7Y0 433 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 CAAP1Q9H8G2 361 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SYNPO2LQ9H987 977 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 LYRM4Q9HD34 91 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SLAMF7Q9NQ25 335 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SEMA3GQ9NS98 782 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 GPATCH2Q9NW75 528 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 ADPRHL2Q9NX46 363 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 THUMPD1Q9NXG2 353 aaKnown RBP7.62□□□□□ -1.19
COL4A5-208ENST00000505728 FBXW2Q9UKT8 454 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 CES1P1Q9UKY3 287 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 ATG4BQ9Y4P1 393 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 ASXL3Q9C0F0 2248 aa7.62□□□□□ -1.19
COL4A5-208ENST00000505728 SCN2AQ99250 2005 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 PCDH15Q96QU1 1955 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 LOC105369274A0A096LPK9 316 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 LOC102723532A0A0G2JNH3 316 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 A0A1B0GTW7 788 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 FAM149AA5PLN7 773 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 SAC3D1A6NKF1 404 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 ACOX3O15254 700 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 P2RX6O15547 441 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 SRPX2O60687 465 aaPredicted RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 DPM1O60762 260 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 RASAL1O95294 804 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 AIFM1O95831 613 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CST1P01037 141 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 C1QCP02747 245 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 STATHP02808 62 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 NUDT7P0C024 238 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 ETFAP13804 333 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 PVRP15151 417 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 GNSP15586 552 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 TYRP1P17643 537 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CPN2P22792 545 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CERS1P27544 350 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 TLX1P31314 330 aaPredicted RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 MPIP34949 423 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 BUD31P41223 144 aaPredicted RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 DSTNP60981 165 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 MRPS35P82673 323 aaKnown RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CDK6Q00534 326 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 EEF1A2Q05639 463 aaKnown RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 SRSF5Q13243 272 aaKnown RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 RUNX2Q13950 521 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 SCARB2Q14108 478 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CEBPEQ15744 281 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 NKG7Q16617 165 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 SPDYE7PQ495Y7 208 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 C14orf28Q4W4Y0 310 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 LRRC23Q53EV4 343 aaPredicted RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CRB2Q5IJ48 1285 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 COX20Q5RI15 118 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 NIPAL1Q6NVV3 410 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 ANGPTL8Q6UXH0 198 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 PIWIL3Q7Z3Z3 882 aaKnown RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 C6orf120Q7Z4R8 191 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 PATL1Q86TB9 770 aaKnown RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 RNF130Q86XS8 419 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 ZDHHC21Q8IVQ6 265 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 OR4N4Q8N0Y3 316 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CLEC4FQ8N1N0 589 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 SVOPLQ8N434 492 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 CBR4Q8N4T8 237 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 DNAJC22Q8N4W6 341 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 FAM86B1Q8N7N1 296 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 C19orf47Q8N9M1 422 aaKnown RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 OR5K1Q8NHB7 308 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 PNPT1Q8TCS8 783 aaKnown RBP7.61□□□□□ -1.19
COL4A5-208ENST00000505728 UCN3Q969E3 161 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 TCTN2Q96GX1 697 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 VPS50Q96JG6 964 aa7.61□□□□□ -1.19
COL4A5-208ENST00000505728 AMDHD1Q96NU7 426 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms