RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 GATA5Q9BWX5 397 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 HOXD1Q9GZZ0 328 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CNTNAP2Q9UHC6 1331 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 MYO16Q9Y6X6 1858 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CITO14578 2027 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 RAMP2O60895 175 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 AIFM1O95831 613 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 METTL15P1P0C7V9 234 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 C4orf17Q53FE4 359 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 MRPL41Q8IXM3 137 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CYP4X1Q8N118 509 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 EIF4E3Q8N5X7 224 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SLC35B4Q969S0 331 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SAT2Q96F10 170 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 POLRMTO00411 1230 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 MMP7P09237 267 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 UNGP13051 313 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CNR1P21554 472 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 LPOP22079 712 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 GPR33Q49SQ1 333 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ZNF783Q6ZMS7 281 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 XYLT1Q86Y38 959 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 APCDD1Q8J025 514 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 C7orf31Q8N865 590 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 TMEM18Q96B42 140 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 KIF12Q96FN5 646 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 NECTIN4Q96NY8 510 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CHRDL1Q9BU40 450 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ABCG4Q9H172 646 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 TMEM27Q9HBJ8 222 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SIRT7Q9NRC8 400 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SCN7AQ01118 1682 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 DAPL1A0PJW8 107 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 TMEM72A0PK05 275 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 UBFD1O14562 309 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 AKAIN1P0CW23 69 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CXCR1P25024 350 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CAP2P40123 477 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CLDN20P56880 219 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 DBPQ10586 325 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 LEXMQ3ZCV2 418 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SAPCD1Q5SSQ6 148 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 RBMS3Q6XE24 437 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 JAZF1Q86VZ6 243 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ZNF485Q8NCK3 441 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SLC24A4Q8NFF2 622 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 DUSP19Q8WTR2 217 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 EDEM1Q92611 657 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SLC25A46Q96AG3 418 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CCDC3Q9BQI4 270 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 DPP7Q9UHL4 492 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 GTF2A1LQ9UNN4 478 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ZNFX1Q9P2E3 1918 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 IFNA5P01569 189 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ALPIP09923 528 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 RRASP10301 218 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 HNF1BP35680 557 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CPT1AP50416 773 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 STXBP1P61764 594 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 BRAT1Q6PJG6 821 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CADM2Q8N3J6 435 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 YIPF7Q8N8F6 280 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SEMA4DQ92854 862 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 FAM84BQ96KN1 310 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SPO11Q9Y5K1 396 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ACKR2O00590 384 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 TREHO43280 583 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 FGF19O95750 216 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ASGR1P07306 291 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 THBS1P07996 1170 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ZBTB48P10074 688 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 HTR3AP46098 478 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CACNB1Q02641 598 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 FGFBP1Q14512 234 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 DHCR24Q15392 516 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 EXOSC6Q5RKV6 272 aaKnown RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 TEX261Q6UWH6 196 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 SHKBP1Q8TBC3 707 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 OR8D1Q8WZ84 308 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 KIAA1191Q96A73 305 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 EPHA6Q9UF33 1036 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 CAMK2AQ9UQM7 478 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 U3KQ87 197 aa5.85□□□□□ -1.47
LINC02397-201ENST00000504409 COL2A1P02458 1487 aaPredicted RBP5.85□□□□□ -1.47
LINC02397-201ENST00000504409 ZNF541Q9H0D2 1346 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 CXorf65A6NEN9 183 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 GAPDHSO14556 408 aaPredicted RBP5.84□□□□□ -1.47
LINC02397-201ENST00000504409 GLAP06280 429 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 STT3AP46977 705 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 ZNF345Q14585 488 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 PHTF2Q8N3S3 785 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 GPR26Q8NDV2 337 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 MUS81Q96NY9 551 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 ALG9Q9H6U8 611 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 PBX3P40426 434 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 NKX3-2P78367 333 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 CRADDP78560 199 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 NHSL2Q5HYW2 709 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 TMEM69Q5SWH9 247 aa5.84□□□□□ -1.47
LINC02397-201ENST00000504409 PIWIL3Q7Z3Z3 882 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms