RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 UTP15Q8TED0 518 aaKnown RBP20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 SMIM10Q96HG1 83 aa20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 YTHDF1Q9BYJ9 559 aaKnown RBP20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 GRIP2Q9C0E4 1043 aa20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 LYARQ9NX58 379 aaKnown RBP20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 ZSCAN32Q9NX65 697 aa20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 NDUFAF4Q9P032 175 aa20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 SAMHD1Q9Y3Z3 626 aaKnown RBP20.2■□□□□ 0.82
UBE2D3-216ENST00000503742 IFNA14P01570 189 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 NTSP30990 170 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 C18orf63Q68DL7 685 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 KDM4DQ6B0I6 523 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 PTCRAQ6ISU1 281 aaPredicted RBP20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 SLC48A1Q6P1K1 146 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 PARGQ86W56 976 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 SLC38A5Q8WUX1 472 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 LZICQ8WZA0 190 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 THAP11Q96EK4 314 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 CNRIP1Q96F85 164 aaPredicted RBP20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 EPYCQ99645 322 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 SERHL2Q9H4I8 314 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 REEP1Q9H902 201 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 TUBA8Q9NY65 449 aaPredicted RBP20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 MRPS17Q9Y2R5 130 aaKnown RBP20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 PRAMEF25A6NGN4 478 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 ENO4A6NNW6 628 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 C2orf74A8MZ97 194 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 TFPTP0C1Z6 253 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 SLC35G6P0C7Q6 338 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 ZNF888P0CJ79 500 aaPredicted RBP20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 CTSEP14091 401 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 DAPP51397 102 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 BLKP51451 505 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 NCBP2P52298 156 aaKnown RBP eCLIP20.19■□□□□ 0.823e-11■■□□□ 12.6
UBE2D3-216ENST00000503742 RAD23AP54725 363 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 SNRPNP63162 240 aaKnown RBP20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 BTN3A2P78410 334 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 UBXN2BQ14CS0 331 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 LAPTM4AQ15012 233 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 CEBPEQ15744 281 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 MAPK11Q15759 364 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 SUN3Q8TAQ9 357 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 SPPL2AQ8TCT8 520 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 BBS4Q96RK4 519 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 MAPKAP1Q9BPZ7 522 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 THSD1Q9NS62 852 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 EVA1BQ9NVM1 165 aa20.19■□□□□ 0.82
UBE2D3-216ENST00000503742 HMGN4O00479 90 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 SLC16A6O15403 523 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 P2RX6O15547 441 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 LSSP48449 732 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 STARD6P59095 220 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 TMEM64Q6YI46 380 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 DGLUCYQ7Z3D6 616 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 ZNF555Q8NEP9 628 aa20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 THUMPD1Q9NXG2 353 aaKnown RBP20.18■□□□□ 0.82
UBE2D3-216ENST00000503742 A0A0J9YVX5 310 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ERAL1O75616 437 aaKnown RBP20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 OR6B1O95007 311 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 BMP10O95393 424 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 C9P02748 559 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 TNFRSF1BP20333 461 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ALDH3B2P48448 385 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 CDH15P55291 814 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 DUSP2Q05923 314 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 C1orf61Q13536 156 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 TP53BP2Q13625 1128 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 THAP5Q7Z6K1 395 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ARMC8Q8IUR7 673 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 PDP1Q9P0J1 537 aaPredicted RBP20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 PCDHGB3Q9Y5G1 929 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ORC6Q9Y5N6 252 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 TDRD6O60522 2096 aaKnown RBP20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 A0A087WXM4 84 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 LOC100130705A0A1B0GUX0 176 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 FAM170BA6NMN3 283 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 VILLO15195 856 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ITGAMP11215 1152 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 IL9P15248 144 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 IGFBP5P24593 272 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 GPC1P35052 558 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 C11orf91Q3C1V1 193 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 C8orf59Q8N0T1 100 aaPredicted RBP20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 BAHD1Q8TBE0 780 aaPredicted RBP20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 SFXN5Q8TD22 340 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ADAMTS16Q8TE57 1224 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 GEMIN6Q8WXD5 167 aaKnown RBP20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 RAB8BQ92930 207 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 TMEM19Q96HH6 336 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ZNF347Q96SE7 839 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 LRRC61Q9BV99 259 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 FOXQ1Q9C009 403 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 ROGDIQ9GZN7 287 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 HRASLS2Q9NWW9 162 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 RAB23Q9ULC3 237 aa20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 COLQQ9Y215 455 aaPredicted RBP20.17■□□□□ 0.82
UBE2D3-216ENST00000503742 METTL12A8MUP2 240 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 PRAMEF10O60809 474 aa20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 MITFO75030 526 aaPredicted RBP20.16■□□□□ 0.82
UBE2D3-216ENST00000503742 WNT1P04628 370 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms