RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 NUP37Q8NFH4 326 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 RPLP0P6Q8NHW5 317 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CD99L2Q8TCZ2 262 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLCO2A1Q92959 643 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM46BQ96A09 425 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 BPIFA2Q96DR5 249 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 DTNBP1Q96EV8 351 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CNRIP1Q96F85 164 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 PCDHB18PQ96TA0 734 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SSX3Q99909 188 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 NCOR1P1Q9H4R4 102 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 MTHFD2LQ9H903 347 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 GPN1Q9HCN4 374 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 NGBQ9NPG2 151 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 B3GAT2Q9NPZ5 323 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CENPMQ9NSP4 180 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 PNPLA3Q9NST1 481 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 NMRK1Q9NWW6 199 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 BARHL2Q9NY43 387 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMOD2Q9NZR1 351 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 KCNN3Q9UGI6 736 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 LNPEPQ9UIQ6 1025 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF510Q9Y2H8 683 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CAB39Q9Y376 341 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 RNF123Q5XPI4 1314 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 A0A1B0GWJ7 208 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 C5orf51A6NDU8 294 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 NKX6-3A6NJ46 265 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM25EA8MYX2 175 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 TCP10L2B9ZVM9 353 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 F8WDY8 70 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CASQ2O14958 399 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SIGLEC5O15389 551 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ARHGEF9O43307 516 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CLN5O75503 358 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CALCAP01258 141 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 RPLP0P05388 317 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ODC1P11926 461 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SKILP12757 684 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 C4BPBP20851 252 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ACP1P24666 158 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCNCP24863 283 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 DNAJB1P25685 340 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 GIFP27352 417 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 GJB2P29033 226 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 PDHA2P29803 388 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SOX6P35712 828 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CLCN4P51793 760 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SMSP52788 366 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 HUNKP57058 714 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 GALK2Q01415 458 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CNTN1Q12860 1018 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 PPP1R8Q12972 351 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CHIT1Q13231 466 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 GPM6BQ13491 265 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CEACAM7Q14002 265 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 GIT2Q14161 759 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 NECTIN1Q15223 517 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 STXBP2Q15833 593 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 MTHFSDQ2M296 383 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 RABL6Q3YEC7 729 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 HERC4Q5GLZ8 1057 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPANXN4Q5MJ08 99 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ATAD3BQ5T9A4 648 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZC2HC1BQ5TFG8 222 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 LYPLAL1Q5VWZ2 237 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF776Q68DI1 518 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 KCTD11Q693B1 232 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 RAET1GQ6H3X3 334 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CENPPQ6IPU0 288 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 KIF6Q6ZMV9 814 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 FRRS1Q6ZNA5 592 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 Q6ZVQ6 151 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 C1orf186Q6ZWK4 172 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 Q71RC1 249 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 PRSS42Q7Z5A4 293 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 UNC5CLQ8IV45 518 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SERPINA12Q8IW75 414 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 LAX1Q8IWV1 398 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLC22A15Q8IZD6 547 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF444Q8N0Y2 327 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 THEM5Q8N1Q8 247 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLC43A2Q8N370 569 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR52E1Q8NGJ3 308 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR13C5Q8NGS8 318 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ATP8B4Q8TF62 1192 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 CHURC1Q8WUH1 139 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SMPDL3AQ92484 453 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 GGHQ92820 318 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLC35C1Q96A29 364 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 TUBGCP3Q96CW5 907 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 MRPL38Q96DV4 380 aaKnown RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF274Q96GC6 653 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 EPSTI1Q96J88 318 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 POM121L2Q96KW2 1035 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 LURAP1Q96LR2 239 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF560Q96MR9 790 aa2.06□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPATA13Q96N96 652 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms