RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CLEC6AQ6EIG7 209 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 GALNT18Q6P9A2 607 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 ZCCHC23Q6ZST2 131 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 NUDCD3Q8IVD9 361 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 OR4N5Q8IXE1 308 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 LGI4Q8N135 537 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 KIF2BQ8N4N8 673 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 SLC5A8Q8N695 610 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 OR14A16Q8NHC5 309 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 DNAJB14Q8TBM8 379 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 PTPMT1Q8WUK0 201 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 HAS2Q92819 552 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 DAZLQ92904 295 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 TM4SF18Q96CE8 201 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 APIPQ96GX9 242 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 ZNF354BQ96LW1 612 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 MFRPQ9BY79 579 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 RNF32Q9H0A6 362 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 KCNK9Q9NPC2 374 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 CLCA3PQ9Y6N3 262 aa17.02■□□□□ 0.32
PDLIM7-209ENST00000503346 MYOCOSA0A1B0GUC4 107 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 GLOD5A6NK44 160 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 WASHC1A8K0Z3 465 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 NPIPB8E9PQR5 432 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 PGRMC2O15173 223 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 RSL1D1O76021 490 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 CLCN2P51788 898 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 RAE1P78406 368 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 ACSM2AQ08AH3 577 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 MEP1AQ16819 746 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 IMPG1Q17R60 797 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 COLEC12Q5KU26 742 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 ACER2Q5QJU3 275 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 ACSM2BQ68CK6 577 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 CRLF3Q8IUI8 442 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 Q8NA96 180 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 MORN4Q8NDC4 146 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 UCN3Q969E3 161 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 TLCD1Q96CP7 247 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 VMP1Q96GC9 406 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 PKNOX2Q96KN3 472 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 DGAT2Q96PD7 388 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 NPAS2Q99743 824 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 PELOQ9BRX2 385 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 EPN3Q9H201 632 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 STMN3Q9NZ72 180 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 CCL27Q9Y4X3 112 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 PCDHA9Q9Y5H5 950 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 CSAG2Q9Y5P2 127 aa17.01■□□□□ 0.31
PDLIM7-209ENST00000503346 C1orf226A1L170 272 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 DYTNA2CJ06 578 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 PCDH7O60245 1069 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 COX7A2P14406 83 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 ALOX15P16050 662 aaPredicted RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 H2AFXP16104 143 aaPredicted RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 TNNI3P19429 210 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 TIA1P31483 386 aaKnown RBP eCLIP17■□□□□ 0.311e-6■□□□□ 11.1
PDLIM7-209ENST00000503346 ARRB2P32121 409 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 PLIN5Q00G26 463 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 PLEKHN1Q494U1 663 aaPredicted RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 FCRLBQ6BAA4 426 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 ST13P4Q8IZP2 240 aaPredicted RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 CLYBLQ8N0X4 340 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 ARMC10Q8N2F6 343 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 NCLNQ969V3 563 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 METTL2AQ96IZ6 378 aaKnown RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 ARGLU1Q9NWB6 273 aaPredicted RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 ZNF223Q9UK11 482 aaPredicted RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 TRAF6Q9Y4K3 522 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 DNAJC15Q9Y5T4 150 aa17■□□□□ 0.31
PDLIM7-209ENST00000503346 TNRC6AQ8NDV7 1962 aaKnown RBP17■□□□□ 0.31
PDLIM7-209ENST00000503346 TRBV11-1A0A0K0K1C0 115 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 C17orf105B2RV13 164 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 SLC28A1O00337 649 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 CDK2AP1O14519 115 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 DDAH2O95865 285 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 WDPCPO95876 746 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 CHEK2O96017 543 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 SERPINE1P05121 402 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 PLA2G2AP14555 144 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 PRPH2P23942 346 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 GALNSP34059 522 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 GSTM5P46439 218 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 SLC18A1P54219 525 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 MAGOHP61326 146 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 ARG2P78540 354 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 BTKQ06187 659 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 TLR1Q15399 786 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 UGT3A2Q3SY77 523 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 SPDYAQ5MJ70 313 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 SLC48A1Q6P1K1 146 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 RPS19BP1Q86WX3 136 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 OR1N1Q8NGS0 311 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 PPP1R14CQ8TAE6 165 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 FAM76AQ8TAV0 307 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 RBM18Q96H35 190 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 FAIM2Q9BWQ8 316 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 DEFB126Q9BYW3 111 aa16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 ILKAPQ9H0C8 392 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-209ENST00000503346 TUBB1Q9H4B7 451 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms