RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PCGF2P35227 344 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 RAB28P51157 221 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 CDH15P55291 814 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 CTBSQ01459 385 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 PPP1R8Q12972 351 aaKnown RBP11.02□□□□□ -0.65
USP46-204ENST00000503060 CCNYL2Q5T2Q4 361 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 DGCR14Q96DF8 476 aaKnown RBP11.02□□□□□ -0.65
USP46-204ENST00000503060 F2RL3Q96RI0 385 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 MYOCQ99972 504 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 ZNF717Q9BY31 904 aaPredicted RBP11.02□□□□□ -0.65
USP46-204ENST00000503060 XKR8Q9H6D3 395 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 IL1RAPQ9NPH3 570 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 GPSM3Q9Y4H4 160 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 C5orf42Q9H799 3197 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 FEZF1A0PJY2 475 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MEN1O00255 615 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 SLC31A1O15431 190 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PDPK1O15530 556 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 IDH3BO43837 385 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 ALOX5P09917 674 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PKLRP30613 574 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 BSGP35613 385 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 LTBRP36941 435 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 ALDH3B2P48448 385 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MVDP53602 400 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PPP2CBP62714 309 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PPP2CAP67775 309 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 CLCA4Q14CN2 919 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 RPS26P11Q5JNZ5 115 aaPredicted RBP11.01□□□□□ -0.65
USP46-204ENST00000503060 ZNF852Q6ZMS4 543 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 BEND4Q6ZU67 534 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 FAM124AQ86V42 546 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 HIPK1Q86Z02 1210 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP46-204ENST00000503060 NAGSQ8N159 534 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MOSPD2Q8NHP6 518 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 IFI44Q8TCB0 444 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 NCSTNQ92542 709 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 HSH2DQ96JZ2 352 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 SLC35A5Q9BS91 424 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 RBM38Q9H0Z9 239 aaKnown RBP11.01□□□□□ -0.65
USP46-204ENST00000503060 TOR3AQ9H497 397 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 RAD21L1Q9H4I0 556 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PLSCR4Q9NRQ2 329 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 VNN3Q9NY84 501 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 SCML1Q9UN30 329 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PCDHGA2Q9Y5H1 932 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 A0A087WXM4 84 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 OR6C74A6NCV1 312 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 ACOD1A6NK06 481 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PDZK1P1A8MUH7 402 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 VILLO15195 856 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 NOBOXO60393 691 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 GUCY1B2O75343 617 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 BMP10O95393 424 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PLGP00747 810 aaPredicted RBP11.01□□□□□ -0.65
USP46-204ENST00000503060 POU2F1P14859 743 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 GSTT1P30711 240 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 CSNK1G2P78368 415 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 EPS8Q12929 822 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 PLCL1Q15111 1095 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 ANKRD34AQ69YU3 496 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 OR2T5Q6IEZ7 315 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 BORAQ6PGQ7 559 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 VTCN1Q7Z7D3 282 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 KRT73Q86Y46 540 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MMP21Q8N119 569 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 C11orf65Q8NCR3 313 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 OR52N2Q8NGI0 321 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 OR56B2PQ8NGI1 322 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 OR2L8Q8NGY9 312 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 OR2T29Q8NH02 315 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 ASB12Q8WXK4 309 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MAL2Q969L2 176 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 SIPA1Q96FS4 1042 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 SCARF2Q96GP6 870 aaPredicted RBP11.01□□□□□ -0.65
USP46-204ENST00000503060 MSLNLQ96KJ4 702 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MBOAT4Q96T53 435 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 RAB11FIP5Q9BXF6 653 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MVB12BQ9H7P6 319 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 MIEF1Q9NQG6 463 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 GPATCH2Q9NW75 528 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 FAF1Q9UNN5 650 aaPredicted RBP11.01□□□□□ -0.65
USP46-204ENST00000503060 ABCG2Q9UNQ0 655 aa11.01□□□□□ -0.65
USP46-204ENST00000503060 WBP11Q9Y2W2 641 aaKnown RBP11.01□□□□□ -0.65
USP46-204ENST00000503060 A0A1W2PRB8 838 aa11□□□□□ -0.65
USP46-204ENST00000503060 CAPN5O15484 640 aaPredicted RBP11□□□□□ -0.65
USP46-204ENST00000503060 OR1F1O43749 312 aa11□□□□□ -0.65
USP46-204ENST00000503060 FABP3P05413 133 aa11□□□□□ -0.65
USP46-204ENST00000503060 ETFAP13804 333 aa11□□□□□ -0.65
USP46-204ENST00000503060 NAGAP17050 411 aa11□□□□□ -0.65
USP46-204ENST00000503060 MAPK3P27361 379 aaPredicted RBP11□□□□□ -0.65
USP46-204ENST00000503060 CRATP43155 626 aa11□□□□□ -0.65
USP46-204ENST00000503060 PRDX1Q06830 199 aaKnown RBP11□□□□□ -0.65
USP46-204ENST00000503060 COTL1Q14019 142 aa11□□□□□ -0.65
USP46-204ENST00000503060 KRT33BQ14525 404 aa11□□□□□ -0.65
USP46-204ENST00000503060 UAP1L1Q3KQV9 507 aa11□□□□□ -0.65
USP46-204ENST00000503060 COX20Q5RI15 118 aa11□□□□□ -0.65
USP46-204ENST00000503060 TTC23Q5W5X9 447 aa11□□□□□ -0.65
USP46-204ENST00000503060 PAGE2Q7Z2X7 111 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms