RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 FRMPD2BQ6IN97 320 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PNCKQ6P2M8 343 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 ADAMTSL4Q6UY14 1074 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PLEKHG7Q6ZR37 379 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 USP43Q70EL4 1123 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 TUBA1AQ71U36 451 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 LRRTM4Q86VH4 590 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 RBM45Q8IUH3 476 aaKnown RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 AMER3Q8N944 861 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 OR4D11Q8NGI4 311 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PSMA8Q8TAA3 256 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 OR5M11Q96RB7 305 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 CENPOQ9BU64 300 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 ANKHQ9HCJ1 492 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PCDHGA3Q9Y5H0 932 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 GOLGA4Q13439 2230 aaKnown RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 A0A0G2JN53 185 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 HMGN4O00479 90 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PPM1DO15297 605 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 TBX19O60806 448 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 NFATC1O95644 943 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 IGFBP1P08833 259 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 FEN1P39748 380 aaKnown RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 FRKP42685 505 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 CCR8P51685 355 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PPP5CP53041 499 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 ARHGAP19Q14CB8 494 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 HEPACAMQ14CZ8 416 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 INAVAQ3KP66 663 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 FBXO43Q4G163 708 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PIP5KL1Q5T9C9 394 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 METRNLQ641Q3 311 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 TCTN3Q6NUS6 607 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 C6orf120Q7Z4R8 191 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 LINC01555Q8NAE3 123 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 VANGL1Q8TAA9 524 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 SMG7Q92540 1137 aaKnown RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 DACH2Q96NX9 599 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 ROGDIQ9GZN7 287 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 C6orf62Q9GZU0 229 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-204ENST00000501271 MMP27Q9H306 513 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 NEUROD4Q9HD90 331 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 REV1Q9UBZ9 1251 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 IFT52Q9Y366 437 aa9.36□□□□□ -0.91
CLIP1-204ENST00000501271 PRAMEF27A3QJZ7 478 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 LINC01553A4QN01 128 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 IGLON5A6NGN9 336 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ANHXE9PGG2 379 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 NDUFS4O43181 175 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 SOX14O95416 240 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 IMPDH2P12268 514 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ELAVL4P26378 380 aaKnown RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 RPS3AP61247 264 aaKnown RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CBX3Q13185 183 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 TP53BP2Q13625 1128 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 WSCD2Q2TBF2 565 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 SPDYE7PQ495Y7 208 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 TMC5Q6UXY8 1006 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 DEF8Q6ZN54 512 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 PTCHD4Q6ZW05 846 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 WDR53Q7Z5U6 358 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 UBE3DQ7Z6J8 389 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 DSG4Q86SJ6 1040 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 COMTD1Q86VU5 262 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 NUDT13Q86X67 352 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 LACC1Q8IV20 430 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 RBM12BQ8IXT5 1001 aaKnown RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CADM3Q8N126 398 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 MINDY2Q8NBR6 621 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 SMPDL3AQ92484 453 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 IL4I1Q96RQ9 567 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CHCHD6Q9BRQ6 235 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CDADC1Q9BWV3 514 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 NXF2Q9GZY0 626 aaKnown RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 PRSS16Q9NQE7 514 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ENOPH1Q9UHY7 261 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ATG2AQ2TAZ0 1938 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 AGAP5A6NIR3 686 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 C1QTNF3-AMACRE9PGA6 284 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ZW10O43264 779 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 OR1F1O43749 312 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 SH3BP5O60239 455 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 LCMT2O60294 686 aaKnown RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ADAP00813 363 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 EPHX1P07099 455 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CD72P21854 359 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CXCR2P25025 360 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 DRD3P35462 400 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 SLC15A1P46059 708 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CLCNKAP51800 687 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 MED22Q15528 200 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ZNF367Q7RTV3 350 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 SLC22A16Q86VW1 577 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 ZBTB8BQ8NAP8 495 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-204ENST00000501271 SUSD6Q92537 303 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 BADQ92934 168 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 CRELD1Q96HD1 420 aa9.35□□□□□ -0.91
CLIP1-204ENST00000501271 Q96MT0 163 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms