RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 B4GALNT1Q00973 533 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 CD47Q08722 323 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 HSPA14Q0VDF9 509 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 NFATC3Q12968 1075 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 BFSP2Q13515 415 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 RAPSNQ13702 412 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 ATP13A5Q4VNC0 1218 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 VRK3Q8IV63 474 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 MICU2Q8IYU8 434 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 SPARTQ8N0X7 666 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 ZCCHC7Q8N3Z6 543 aaKnown RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 DCAF4L2Q8NA75 395 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 LEMD2Q8NC56 503 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 HJURPQ8NCD3 748 aaPredicted RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 CHDHQ8NE62 594 aaPredicted RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 MIPOL1Q8TD10 442 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 DUSP19Q8WTR2 217 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 VOPP1Q96AW1 172 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 SDCCAG3Q96C92 435 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 FBXL8Q96CD0 374 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 IGSF21Q96ID5 467 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 TMEM175Q9BSA9 504 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 NTMT1Q9BV86 223 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 DGCR6LQ9BY27 220 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 ZNF552Q9H707 407 aaPredicted RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 PARVBQ9HBI1 364 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 ABCB8Q9NUT2 735 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 PAK1IP1Q9NWT1 392 aaPredicted RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 C1orf109Q9NX04 203 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 SRRDQ9UH36 339 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 CIDEBQ9UHD4 219 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 STOML2Q9UJZ1 356 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 PDE10AQ9Y233 779 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 MICAL3Q7RTP6 2002 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 TRBV5-3A0A0A0MS03 114 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 SH3PXD2BA1X283 911 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 SPRY1O43609 319 aaPredicted RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 MITFO75030 526 aaPredicted RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 SEC14L2O76054 403 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 DIRAS1O95057 198 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 CLDN9O95484 217 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 EFEMP2O95967 443 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 ABCB1P08183 1280 aaPredicted RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 EBLN1P0CF75 366 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 MSH3P20585 1137 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 TTKP33981 857 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 GRK3P35626 688 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 DCTP40126 519 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 NRIP1P48552 1158 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 PLA2G16P53816 162 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 LDLRAP1Q5SW96 308 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 LRRC66Q68CR7 880 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 CES5AQ6NT32 575 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 MACC1Q6ZN28 852 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 ZNF600Q6ZNG1 722 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 OR52E1Q8NGJ3 308 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 OR9A1PQ8NGU1 263 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 RAET1EQ8TD07 263 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 SELENOMQ8WWX9 145 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 PIMREGQ9BSJ6 248 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 DCAF13Q9NV06 445 aaKnown RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 CD84Q9UIB8 345 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 PADI1Q9ULC6 663 aa8.52□□□□□ -1.05
FN1-227ENST00000498719 CFAP20Q9Y6A4 193 aaKnown RBP8.52□□□□□ -1.05
FN1-227ENST00000498719 XPNPEP2O43895 674 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PRAMEF4O60810 478 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SLCO2B1O94956 709 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 TGFAP01135 160 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 CELA3BP08861 270 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 CYP4B1P13584 511 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 GJA1P17302 382 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 EFNA1P20827 205 aaPredicted RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 LHCGRP22888 699 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PTPN6P29350 595 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SPAM1P38567 509 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PSMD7P51665 324 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PRRX1P54821 245 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 RPS14P62263 151 aaKnown RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 MAD2L1Q13257 205 aaPredicted RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 C6orf141Q5SZD1 244 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 PRAMEF9Q5VWM5 478 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 NEK5Q6P3R8 708 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 FAM129CQ86XR2 697 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 BBS7Q8IWZ6 715 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 CNIH3Q8TBE1 160 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 MYLIPQ8WY64 445 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 LINC00615Q96LM1 132 aaPredicted RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 JAM3Q9BX67 310 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 EBPLQ9BY08 206 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 YTHDF1Q9BYJ9 559 aaKnown RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 GPR61Q9BZJ8 451 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SMG9Q9H0W8 520 aaKnown RBP8.51□□□□□ -1.05
FN1-227ENST00000498719 GPATCH2Q9NW75 528 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 KLHL9Q9P2J3 617 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 TRPS1Q9UHF7 1281 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 SLCO3A1Q9UIG8 710 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 KCNE2Q9Y6J6 123 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 DENND4CQ5VZ89 1909 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 LOC100130705A0A1B0GUX0 176 aa8.51□□□□□ -1.05
FN1-227ENST00000498719 H0Y8X5 98 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms