RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 VPS11Q9H270 941 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 TIMMDC1Q9NPL8 285 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 HPF1Q9NWY4 346 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 MTRF1LQ9UGC7 380 aaKnown RBP13.24□□□□□ -0.29
VTI1A-209ENST00000496445 RNF11Q9Y3C5 154 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 ATG4BQ9Y4P1 393 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 ANGPTL3Q9Y5C1 460 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 CREBBPQ92793 2442 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 NCKAP5O14513 1909 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 A0A0A6YYD5 115 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 HRKO00198 91 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 OR7A17O14581 309 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 TMPRSS11DO60235 418 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 EEDO75530 441 aaKnown RBP13.23□□□□□ -0.29
VTI1A-209ENST00000496445 TUBB4AP04350 444 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 IGKV3-11P04433 115 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 ESRRAP11474 423 aaPredicted RBP13.23□□□□□ -0.29
VTI1A-209ENST00000496445 HTR1EP28566 365 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 BSGP35613 385 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 PIK3CGP48736 1102 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 RAP1GDS1P52306 607 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 ARFIP1P53367 373 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 FOLH1Q04609 750 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 CPSF6Q16630 551 aaKnown RBP eCLIP13.23□□□□□ -0.29
VTI1A-209ENST00000496445 ZNF630Q2M218 657 aaPredicted RBP13.23□□□□□ -0.29
VTI1A-209ENST00000496445 MRM1Q6IN84 353 aaKnown RBP13.23□□□□□ -0.29
VTI1A-209ENST00000496445 IL20RBQ6UXL0 311 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 C3P1Q6ZMU1 363 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 DOLPP1Q86YN1 238 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 C9orf40Q8IXQ3 194 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 PTGR2Q8N8N7 351 aaPredicted RBP13.23□□□□□ -0.29
VTI1A-209ENST00000496445 OR52B6Q8NGF0 335 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 OR52N2Q8NGI0 321 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 SCYL1Q96KG9 808 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 CDK15Q96Q40 435 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 DMRTA2Q96SC8 542 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 FMO2Q99518 471 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 RPF2Q9H7B2 306 aaKnown RBP13.23□□□□□ -0.29
VTI1A-209ENST00000496445 IPPKQ9H8X2 491 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 PLSCR2Q9NRY7 297 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 XPR1Q9UBH6 696 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 ERVK-11Q9UQG0 969 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 PCDHGA11Q9Y5H2 935 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 EXPH5Q8NEV8 1989 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 PKDREJQ9NTG1 2253 aa13.23□□□□□ -0.29
VTI1A-209ENST00000496445 A0A1B0GTH9 108 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 G3V3Y1 287 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 C19orf84I3L1E1 186 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 CDC40O60508 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
VTI1A-209ENST00000496445 INHBAP08476 426 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 TNNI3P19429 210 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 AGAP20933 346 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 NEK2P51955 445 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 TRAF3Q13114 568 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 ZNF750Q32MQ0 723 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 FAM219BQ5XKK7 198 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 METTL2BQ6P1Q9 378 aaKnown RBP13.22□□□□□ -0.29
VTI1A-209ENST00000496445 XKRXQ6PP77 449 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 CEP128Q6ZU80 1094 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 GPR180Q86V85 440 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 CD163Q86VB7 1156 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 OR2M7Q8NG81 312 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 FAM57AQ8TBR7 257 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 PHF10Q8WUB8 498 aaKnown RBP13.22□□□□□ -0.29
VTI1A-209ENST00000496445 DCAKDQ8WVC6 231 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 IFT81Q8WYA0 676 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 ZNF592Q92610 1267 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
VTI1A-209ENST00000496445 REPS1Q96D71 796 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 PHF21BQ96EK2 531 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 NSUN5Q96P11 429 aaKnown RBP13.22□□□□□ -0.29
VTI1A-209ENST00000496445 DGAT2Q96PD7 388 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 CENPKQ9BS16 269 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 NOL11Q9H8H0 719 aaKnown RBP13.22□□□□□ -0.29
VTI1A-209ENST00000496445 MS4A12Q9NXJ0 267 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 PHF11Q9UIL8 331 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 PCTPQ9UKL6 214 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 ASB4Q9Y574 426 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 TNPO3Q9Y5L0 923 aaKnown RBP13.22□□□□□ -0.29
VTI1A-209ENST00000496445 DNAJC13O75165 2243 aa13.22□□□□□ -0.29
VTI1A-209ENST00000496445 A0A1B0GTL3 188 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 A0A1W2PR48 441 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 FAM166BA8MTA8 275 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 STX16-NPEPL1H3BU86 382 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 STX16O14662 325 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 PROM1O43490 865 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 GLSO94925 669 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 NADKO95544 446 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 AIFM1O95831 613 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 CLPSP04118 112 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 COX7A2P14406 83 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 PTX3P26022 381 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 SMSP52788 366 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 PHEXP78562 749 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 PLIN5Q00G26 463 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 CUL3Q13618 768 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 MCEMP1Q8IX19 187 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms