RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PRPH2P23942 346 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 SOX8P57073 446 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 SLC26A5P58743 744 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 TRA2BP62995 288 aaKnown RBP18.18■□□□□ 0.5
HDAC4-212ENST00000495497 ZNF750Q32MQ0 723 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 XKR7Q5GH72 579 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 ATG16L1Q676U5 607 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 NOXRED1Q6NXP6 359 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 GALNT18Q6P9A2 607 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 DGAT2L6Q6ZPD8 337 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 TRIM42Q8IWZ5 723 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 CDC26Q8NHZ8 85 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 C9orf43Q8TAL5 461 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-212ENST00000495497 DNAJB14Q8TBM8 379 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 BRIX1Q8TDN6 353 aaKnown RBP18.18■□□□□ 0.5
HDAC4-212ENST00000495497 ZNF75CPQ92670 426 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-212ENST00000495497 WBP1Q96G27 269 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 LHPPQ9H008 270 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 ADNPQ9H2P0 1102 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 ZNF552Q9H707 407 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-212ENST00000495497 THAP1Q9NVV9 213 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 HEY2Q9UBP5 337 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 TP53TG5Q9Y2B4 290 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 DLGAP4Q9Y2H0 992 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 SAGE2PA6NJ88 616 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 PEX11AO75192 247 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 GPR75O95800 540 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 SERPINA7P05543 415 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 ALDH9A1P49189 494 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 RPL38P63173 70 aaKnown RBP18.17■□□□□ 0.5
HDAC4-212ENST00000495497 IGLV3-21P80748 117 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-212ENST00000495497 MYBPC3Q14896 1274 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 RFTN2Q52LD8 501 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-212ENST00000495497 PLAG1Q6DJT9 500 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 OR52E8Q6IFG1 317 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 FAM180BQ6P0A1 224 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 SIRT6Q8N6T7 355 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 NFAM1Q8NET5 270 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-212ENST00000495497 RAB3IL1Q8TBN0 382 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 VTI1BQ9UEU0 232 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 HAO1Q9UJM8 370 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 CES1P1Q9UKY3 287 aa18.17■□□□□ 0.5
HDAC4-212ENST00000495497 CACNA1GO43497 2377 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 C1orf226A1L170 272 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 NPIPB8E9PQR5 432 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 GUCY1B2O75343 617 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 KITP10721 976 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 TNNI3P19429 210 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 TACR1P25103 407 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 OCRLQ01968 901 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 SERTAD2Q14140 314 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 SOWAHCQ53LP3 525 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-212ENST00000495497 SLC48A1Q6P1K1 146 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 KIF2BQ8N4N8 673 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 M1APQ8TC57 530 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 PTPMT1Q8WUK0 201 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-212ENST00000495497 SLC39A7Q92504 469 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 PSMF1Q92530 271 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 C19orf60Q96EN9 201 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 ZBTB20Q9HC78 741 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-212ENST00000495497 ADAP2Q9NPF8 381 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 MARCOQ9UEW3 520 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-212ENST00000495497 TUBD1Q9UJT1 453 aa18.16■□□□□ 0.5
HDAC4-212ENST00000495497 PCDHGA9Q9Y5G4 932 aaKnown RBP18.16■□□□□ 0.5
HDAC4-212ENST00000495497 SNUPNO95149 360 aaKnown RBP18.15■□□□□ 0.5
HDAC4-212ENST00000495497 PRB1P04280 392 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 ICAM2P13598 275 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 ALOX15P16050 662 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-212ENST00000495497 PIK3R1P27986 724 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 STT3AP46977 705 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 ZNF763Q0D2J5 394 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 C2orf80Q0P641 193 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 ELAVL1Q15717 326 aaKnown RBP18.15■□□□□ 0.5
HDAC4-212ENST00000495497 EXT1Q16394 746 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 IRAK1BP1Q5VVH5 260 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 B3GNTL1Q67FW5 361 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-212ENST00000495497 TCTN3Q6NUS6 607 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 ZNF321PQ8N8H1 164 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 OR4K14Q8NGD5 310 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 FAM76AQ8TAV0 307 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 DYDC1Q8WWB3 177 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 EGLN2Q96KS0 407 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 FCRL1Q96LA6 429 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 DGAT2Q96PD7 388 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 FAIM2Q9BWQ8 316 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 NUF2Q9BZD4 464 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 SLC25A18Q9H1K4 315 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 MMP25Q9NPA2 562 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 INTS9Q9NV88 658 aaKnown RBP18.15■□□□□ 0.5
HDAC4-212ENST00000495497 PTGFRNQ9P2B2 879 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 BAIAP2L1Q9UHR4 511 aa18.15■□□□□ 0.5
HDAC4-212ENST00000495497 A8MUI8 341 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 C17orf105B2RV13 164 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 KLF11O14901 512 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 ERAL1O75616 437 aaKnown RBP18.14■□□□□ 0.49
HDAC4-212ENST00000495497 PTGER1P34995 402 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 XKP51811 444 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 PGDP52209 483 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 HK2P52789 917 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 DUSP2Q05923 314 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms