RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.02■□□□□ 0.16
SNX17-209ENST00000494893 SAGE2PA6NJ88 616 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 CLDN4O14493 209 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 MAN1A2O60476 641 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 KLK1P06870 262 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 CHRNGP07510 517 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 SERPINB3P29508 390 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 HMOX2P30519 316 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 GPR143P51810 404 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 IGLV3-21P80748 117 aaPredicted RBP16.01■□□□□ 0.15
SNX17-209ENST00000494893 MFAP5Q13361 173 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 EXT1Q16394 746 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 SLC6A19Q695T7 634 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 H3F3CQ6NXT2 135 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 JMJD6Q6NYC1 403 aaPredicted RBP16.01■□□□□ 0.15
SNX17-209ENST00000494893 LINC00696Q6ZRV3 163 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 CPLX4Q7Z7G2 160 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 OR4N5Q8IXE1 308 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 TEX19Q8NA77 164 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 ELP5Q8TE02 316 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 CCT8L2Q96SF2 557 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 ILKAPQ9H0C8 392 aaPredicted RBP16.01■□□□□ 0.15
SNX17-209ENST00000494893 NSRP1Q9H0G5 558 aaKnown RBP16.01■□□□□ 0.15
SNX17-209ENST00000494893 MMP25Q9NPA2 562 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 LYARQ9NX58 379 aaKnown RBP16.01■□□□□ 0.15
SNX17-209ENST00000494893 PHF11Q9UIL8 331 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 ANAPC2Q9UJX6 822 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 ZNF223Q9UK11 482 aaPredicted RBP16.01■□□□□ 0.15
SNX17-209ENST00000494893 ADAM29Q9UKF5 820 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 G3BP2Q9UN86 482 aaKnown RBP16.01■□□□□ 0.15
SNX17-209ENST00000494893 RAP2CQ9Y3L5 183 aa16.01■□□□□ 0.15
SNX17-209ENST00000494893 SERTM1A2A2V5 107 aa16■□□□□ 0.15
SNX17-209ENST00000494893 DPM1O60762 260 aa16■□□□□ 0.15
SNX17-209ENST00000494893 ULK1O75385 1050 aa16■□□□□ 0.15
SNX17-209ENST00000494893 SORBS2O94875 1100 aaKnown RBP16■□□□□ 0.15
SNX17-209ENST00000494893 TGDSO95455 350 aa16■□□□□ 0.15
SNX17-209ENST00000494893 AIFM1O95831 613 aa16■□□□□ 0.15
SNX17-209ENST00000494893 ALPPP05187 535 aa16■□□□□ 0.15
SNX17-209ENST00000494893 ICAM2P13598 275 aa16■□□□□ 0.15
SNX17-209ENST00000494893 HSD3B1P14060 373 aa16■□□□□ 0.15
SNX17-209ENST00000494893 HSD3B2P26439 372 aa16■□□□□ 0.15
SNX17-209ENST00000494893 CASRP41180 1078 aa16■□□□□ 0.15
SNX17-209ENST00000494893 RAE1P78406 368 aaKnown RBP16■□□□□ 0.15
SNX17-209ENST00000494893 HMGCS1Q01581 520 aa16■□□□□ 0.15
SNX17-209ENST00000494893 CSTF3Q12996 717 aaKnown RBP16■□□□□ 0.15
SNX17-209ENST00000494893 CRB2Q5IJ48 1285 aa16■□□□□ 0.15
SNX17-209ENST00000494893 FCRLBQ6BAA4 426 aa16■□□□□ 0.15
SNX17-209ENST00000494893 ISLR2Q6UXK2 745 aa16■□□□□ 0.15
SNX17-209ENST00000494893 DGAT2L6Q6ZPD8 337 aa16■□□□□ 0.15
SNX17-209ENST00000494893 PRICKLE2Q7Z3G6 844 aa16■□□□□ 0.15
SNX17-209ENST00000494893 HPS6Q86YV9 775 aa16■□□□□ 0.15
SNX17-209ENST00000494893 C1orf52Q8N6N3 182 aaKnown RBP16■□□□□ 0.15
SNX17-209ENST00000494893 APCDD1LQ8NCL9 501 aa16■□□□□ 0.15
SNX17-209ENST00000494893 CHTF18Q8WVB6 975 aa16■□□□□ 0.15
SNX17-209ENST00000494893 C11orf24Q96F05 449 aaPredicted RBP16■□□□□ 0.15
SNX17-209ENST00000494893 ALOXE3Q9BYJ1 711 aa16■□□□□ 0.15
SNX17-209ENST00000494893 RPF2Q9H7B2 306 aaKnown RBP16■□□□□ 0.15
SNX17-209ENST00000494893 PNO1Q9NRX1 252 aaKnown RBP16■□□□□ 0.15
SNX17-209ENST00000494893 LUZP4Q9P127 313 aa16■□□□□ 0.15
SNX17-209ENST00000494893 VPS29Q9UBQ0 182 aa16■□□□□ 0.15
SNX17-209ENST00000494893 PPIEQ9UNP9 301 aaKnown RBP16■□□□□ 0.15
SNX17-209ENST00000494893 A0A1W2PS29 197 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 GLOD5A6NK44 160 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 PGRMC2O15173 223 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 SLC28A2O43868 658 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 KLHL41O60662 606 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 MYO1DO94832 1006 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 FAM107AO95990 144 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 PLA2G2AP14555 144 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 PLEKHN1Q494U1 663 aaPredicted RBP15.99■□□□□ 0.15
SNX17-209ENST00000494893 IRAK1BP1Q5VVH5 260 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 CLEC6AQ6EIG7 209 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 CYP20A1Q6UW02 462 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 Q6ZS92 163 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 CUZD1Q86UP6 607 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 MMP21Q8N119 569 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 ZNF781Q8N8C0 355 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 PTPMT1Q8WUK0 201 aaPredicted RBP15.99■□□□□ 0.15
SNX17-209ENST00000494893 APIPQ96GX9 242 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 LMF1Q96S06 567 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 FAM107BQ9H098 131 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 ADAP2Q9NPF8 381 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 MS4A12Q9NXJ0 267 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 PLA2G3Q9NZ20 509 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 VTI1BQ9UEU0 232 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 CCL27Q9Y4X3 112 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 HEMK1Q9Y5R4 338 aaPredicted RBP15.99■□□□□ 0.15
SNX17-209ENST00000494893 PTGDR2Q9Y5Y4 395 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 SPACA6W5XKT8 324 aa15.99■□□□□ 0.15
SNX17-209ENST00000494893 ARHGAP10A1A4S6 786 aa15.98■□□□□ 0.15
SNX17-209ENST00000494893 BLACEA4D250 179 aa15.98■□□□□ 0.15
SNX17-209ENST00000494893 FGF4P08620 206 aa15.98■□□□□ 0.15
SNX17-209ENST00000494893 NR2F6P10588 404 aa15.98■□□□□ 0.15
SNX17-209ENST00000494893 ST13P50502 369 aaKnown RBP15.98■□□□□ 0.15
SNX17-209ENST00000494893 RPL14P50914 215 aaKnown RBP15.98■□□□□ 0.15
SNX17-209ENST00000494893 FOLH1Q04609 750 aa15.98■□□□□ 0.15
SNX17-209ENST00000494893 ZNF33BQ06732 778 aa15.98■□□□□ 0.15
SNX17-209ENST00000494893 TERF2Q15554 542 aa15.98■□□□□ 0.15
SNX17-209ENST00000494893 ELAVL1Q15717 326 aaKnown RBP15.98■□□□□ 0.15
SNX17-209ENST00000494893 CCNYL2Q5T2Q4 361 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms