RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 FOXA1P55317 472 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 PKNOX1P55347 436 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 OR4D2P58180 307 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 SLC26A5P58743 744 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 NAA20P61599 178 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 IGLV3-21P80748 117 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 GALNT1Q10472 559 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 TBL3Q12788 808 aaKnown RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 LCP2Q13094 533 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 IFT88Q13099 833 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 AP5B1Q2VPB7 878 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 KRT71Q3SY84 523 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 NADK2Q4G0N4 442 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 COLEC12Q5KU26 742 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 BEND6Q5SZJ8 279 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 LIPMQ5VYY2 423 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 SLC6A19Q695T7 634 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 JMJD6Q6NYC1 403 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 Q6ZS92 163 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 GPRIN3Q6ZVF9 776 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 C10orf107Q8IVU9 208 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 METTL4Q8N3J2 472 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 CDYL2Q8N8U2 506 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 APCDD1LQ8NCL9 501 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 M1APQ8TC57 530 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 BRIX1Q8TDN6 353 aaKnown RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 ELP5Q8TE02 316 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 PPP4R1Q8TF05 950 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 ANKRD9Q96BM1 317 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 MTFMTQ96DP5 389 aaKnown RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 C11orf24Q96F05 449 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-217ENST00000494395 SERPINI1Q99574 410 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 NPAS2Q99743 824 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 EPN3Q9H201 632 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 ACBD3Q9H3P7 528 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 MMP25Q9NPA2 562 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 PRTFDC1Q9NRG1 225 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 SNX6Q9UNH7 406 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 STK38LQ9Y2H1 464 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 ATG4BQ9Y4P1 393 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 CSAG2Q9Y5P2 127 aa8.2□□□□□ -1.1
ITGB1-217ENST00000494395 CNTRLQ7Z7A1 2325 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 BLACEA4D250 179 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 PROM1O43490 865 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 FGF17O60258 216 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CTNSO60931 367 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 SPAG7O75391 227 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ALPPP05187 535 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ENO1P06733 434 aaKnown RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 EPXP11678 715 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ICAM2P13598 275 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 HSD3B1P14060 373 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CHN1P15882 459 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CPN2P22792 545 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 HSD3B2P26439 372 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ALDH3A1P30838 453 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ARL1P40616 181 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 GPR143P51810 404 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 TNFRSF17Q02223 184 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ZNF33BQ06732 778 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CSTF3Q12996 717 aaKnown RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 SLAMF1Q13291 335 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 MFAP5Q13361 173 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 TERF2Q15554 542 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 EXT1Q16394 746 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 BTBD16Q32M84 506 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CRB2Q5IJ48 1285 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 AGAP7PQ5VUJ5 663 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 B3GNTL1Q67FW5 361 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 C18orf63Q68DL7 685 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 TTC19Q6DKK2 380 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ISLR2Q6UXK2 745 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 LRIG3Q6UXM1 1119 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ATG14Q6ZNE5 492 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 COMMD6Q7Z4G1 85 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CLNKQ7Z7G1 428 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ZNF605Q86T29 641 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 SIRT6Q8N6T7 355 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CCNYL1Q8N7R7 359 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 TEX19Q8NA77 164 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 OR6Y1Q8NGX8 325 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 TCP10LQ8TDR4 215 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 NUDT8Q8WV74 236 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CHTF18Q8WVB6 975 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 SELENOMQ8WWX9 145 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 AGAP4Q96P64 663 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 FAM111AQ96PZ2 611 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 KCNA7Q96RP8 456 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 LMF1Q96S06 567 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 HBEGFQ99075 208 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 LPAR4Q99677 370 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CENPKQ9BS16 269 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 MECRQ9BV79 373 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 GATA5Q9BWX5 397 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 MRPL1Q9BYD6 325 aaKnown RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ACPTQ9BZG2 426 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 RNF32Q9H0A6 362 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 CLEC4MQ9H2X3 399 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ELOVL6Q9H5J4 265 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms