RNA–Protein interactions for RNA: ENST00000494153.5

HM13-222, Transcript of histocompatibility minor 13, human

TSL 5

Gene HM13, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-222	ENST00000494153	EIF3L	Q9Y262	564 aa	Known RBP	12.8	□□□□□ -0.36
HM13-222	ENST00000494153	DYRK1B	Q9Y463	629 aa		12.8	□□□□□ -0.36
HM13-222	ENST00000494153	NPFFR2	Q9Y5X5	522 aa		12.8	□□□□□ -0.36
HM13-222	ENST00000494153	MED12	Q93074	2177 aa		12.8	□□□□□ -0.36
HM13-222	ENST00000494153	LRIT2	A6NDA9	550 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	SYNDIG1L	A6NDD5	238 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CASK	O14936	926 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	ZNF500	O60304	480 aa	Predicted RBP	12.79	□□□□□ -0.36
HM13-222	ENST00000494153	C1QA	P02745	245 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CERS1	P27544	350 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	PLA2G16	P53816	162 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CDKN2D	P55273	166 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	AP1S2	P56377	157 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	ID2	Q02363	134 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CCNG2	Q16589	344 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	ANKRD22	Q5VYY1	191 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	ARMC3	Q5W041	872 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	VASN	Q6EMK4	673 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	GSTA5	Q7RTV2	222 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	THOC6	Q86W42	341 aa	Known RBP	12.79	□□□□□ -0.36
HM13-222	ENST00000494153	C9orf40	Q8IXQ3	194 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	PM20D2	Q8IYS1	436 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	C9orf106	Q8NAJ2	232 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	FAM13C	Q8NE31	585 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	OR10G3	Q8NGC4	313 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	PPP1R14C	Q8TAE6	165 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	SLC22A8	Q8TCC7	542 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	ATL1	Q8WXF7	558 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CCL19	Q99731	98 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CNIH4	Q9P003	139 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CNOT11	Q9UKZ1	510 aa	Known RBP	12.79	□□□□□ -0.36
HM13-222	ENST00000494153	DAPP1	Q9UN19	280 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	SLC6A5	Q9Y345	797 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	12.79	□□□□□ -0.36
HM13-222	ENST00000494153	CAPN6	Q9Y6Q1	641 aa		12.79	□□□□□ -0.36
HM13-222	ENST00000494153	USF3	Q68DE3	2245 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	MAGEB16	A2A368	324 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	PABPN1L	A6NDY0	278 aa	Known RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	SIAH2	O43255	324 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	LDB3	O75112	727 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	ERN1	O75460	977 aa	Known RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	TRAPPC6A	O75865	159 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	CNOT4	O95628	575 aa	Known RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	TBX6	O95947	436 aa	Predicted RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	KCNJ1	P48048	391 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	PGGT1B	P53609	377 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	KRTAP1-1	Q07627	177 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	TBL3	Q12788	808 aa	Known RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	1e-6	■■■■□ 20.5
HM13-222	ENST00000494153	ACKR1	Q16570	336 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	HSP90AA5P	Q58FG0	334 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	DCST1	Q5T197	706 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	RBM20	Q5T481	1227 aa	Known RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	HMBOX1	Q6NT76	420 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.78	□□□□□ -0.36
HM13-222	ENST00000494153	KIAA1328	Q86T90	577 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	LUZP2	Q86TE4	346 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	LMNTD2	Q8IXW0	634 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	NUBPL	Q8TB37	319 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	CCT6B	Q92526	530 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	WDYHV1	Q96HA8	205 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	DOHH	Q9BU89	302 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	TRIM54	Q9BYV2	358 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	UBTD1	Q9HAC8	227 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	TAS2R13	Q9NYV9	303 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	COPS7A	Q9UBW8	275 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	SLC22A14	Q9Y267	594 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	TESMIN	Q9Y4I5	508 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	MAD1L1	Q9Y6D9	718 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	DSCAM	O60469	2012 aa		12.78	□□□□□ -0.36
HM13-222	ENST00000494153	SDR42E2	A6NKP2	422 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	KIF2A	O00139	706 aa	Predicted RBP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	TRIM3	O75382	744 aa	Predicted RBP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	ACSL3	O95573	720 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	GABRB3	P28472	473 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	SOX18	P35713	384 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	MAGEA6	P43360	314 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	SLCO1A2	P46721	670 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	CPA2	P48052	419 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	CDK9	P50750	372 aa	Known RBP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.77	□□□□□ -0.37	9e-8	■■■■□ 22.4
HM13-222	ENST00000494153	TRIP13	Q15645	432 aa	Predicted RBP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	AGGF1	Q8N302	714 aa	eCLIP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	CALML6	Q8TD86	181 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	SENP5	Q96HI0	755 aa	Predicted RBP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	SERINC2	Q96SA4	455 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	UGT2B28	Q9BY64	529 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	CALHM2	Q9HA72	323 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	IARS2	Q9NSE4	1012 aa	Known RBP	12.77	□□□□□ -0.37
HM13-222	ENST00000494153	IKZF3	Q9UKT9	509 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	PPP2R2C	Q9Y2T4	447 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153	KCNE2	Q9Y6J6	123 aa		12.77	□□□□□ -0.37
HM13-222	ENST00000494153		A0A088AWK7	358 aa		12.76	□□□□□ -0.37
HM13-222	ENST00000494153	DEFB108A	A8MXU0	73 aa		12.76	□□□□□ -0.37
HM13-222	ENST00000494153	HRK	O00198	91 aa		12.76	□□□□□ -0.37
HM13-222	ENST00000494153	IGKV3-11	P04433	115 aa		12.76	□□□□□ -0.37

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