RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TAAR2Q9P1P5 351 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 SAMHD1Q9Y3Z3 626 aaKnown RBP13.11□□□□□ -0.31
VCP-207ENST00000493886 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 SUV39H1O43463 412 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 TNFRSF21O75509 655 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 PAHP00439 452 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 ITIH1P19827 911 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 ARHGDIAP52565 204 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 DSTNP60981 165 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 NEURL2Q9BR09 285 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 C1QTNF7Q9BXJ2 289 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 XKR8Q9H6D3 395 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 NT5DC2Q9H857 520 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 AP1M2Q9Y6Q5 423 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3DA0A087WVF3 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3IA0A087WXS9 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3EA0A087X179 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3KA0A087X1G2 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3FA6NER0 549 aaPredicted RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3LB9A6J9 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 FAM20BO75063 409 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 UGT2B11O75310 529 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 GCM2O75603 506 aaPredicted RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 LCKP06239 509 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3HP0C7X1 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 CD6P30203 668 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 SERPINB1P30740 379 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 DNAJA1P31689 397 aaKnown RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 BSGP35613 385 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 MAPK12P53778 367 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 IFITM3Q01628 133 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 CLCA4Q14CN2 919 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 GCNT6Q5T4J0 391 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3GQ6DHY5 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3CQ6IPX1 549 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 MTSS1LQ765P7 747 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 ADGRF3Q8IZF5 1079 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TBC1D3Q8IZP1 549 aaPredicted RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 TTC29Q8NA56 475 aaPredicted RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 IL17RCQ8NAC3 791 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 GALNT6Q8NCL4 622 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 OR5AK3PQ8NH89 298 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 APOOQ9BUR5 198 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 PITHD1Q9GZP4 211 aaPredicted RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 HEATR5BQ9P2D3 2071 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 OR1F1O43749 312 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 HOXB2P14652 356 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 COL9A1P20849 921 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 FPR1P21462 350 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 CHI3L1P36222 383 aaPredicted RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 RAB28P51157 221 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 KCNJ10P78508 379 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 FADDQ13158 208 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 GNA13Q14344 377 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
VCP-207ENST00000493886 PAGE2Q7Z2X7 111 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 ZNF347Q96SE7 839 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 ATPIF1Q9UII2 106 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 PLXND1Q9Y4D7 1925 aa13.1□□□□□ -0.31
VCP-207ENST00000493886 A0A1W2PQF6 199 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 SLC31A1O15431 190 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 CAPN5O15484 640 aaPredicted RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 ICMTO60725 284 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 EGFP01133 1207 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 DDCP20711 480 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 IFNA8P32881 189 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 CTHP32929 405 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 SOAT1P35610 550 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 ITGA1P56199 1179 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 CSNK1G2P78368 415 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 SLC5A12Q1EHB4 618 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 IQCCQ4KMZ1 466 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 GPR153Q6NV75 609 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 ADCK2Q7Z695 626 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 P2RY8Q86VZ1 359 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 RNF130Q86XS8 419 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 LSMEM1Q8N8F7 131 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 TOR1AIP2Q8NFQ8 470 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 TM4SF18Q96CE8 201 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 ALPK1Q96QP1 1244 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 DOHHQ9BU89 302 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 C1GALT1Q9NS00 363 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.09□□□□□ -0.31
VCP-207ENST00000493886 ICKQ9UPZ9 632 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 MAP4K5Q9Y4K4 846 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 KRBA1A5PL33 1030 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PRR19A6NJB7 356 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 OR52A4PA6NMU1 304 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PDZK1P1A8MUH7 402 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 TMEM229AB2RXF0 380 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 SLC16A6O15403 523 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms