RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ABHD11Q8NFV4 315 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 OR7G3Q8NG95 312 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 OR4K1Q8NGD4 311 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 SLC22A18Q96BI1 424 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 WDR34Q96EX3 536 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 PTCD3Q96EY7 689 aaKnown RBP6.25□□□□□ -1.41
TRA2B-216ENST00000493864 PPP1R36Q96LQ0 422 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 C3orf30Q96M34 536 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 EDEM2Q9BV94 578 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 SSBP3Q9BWW4 388 aaPredicted RBP6.25□□□□□ -1.41
TRA2B-216ENST00000493864 SLC29A3Q9BZD2 475 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 TUBB1Q9H4B7 451 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 WDR55Q9H6Y2 383 aaPredicted RBP6.25□□□□□ -1.41
TRA2B-216ENST00000493864 PELI2Q9HAT8 420 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 MSL2Q9HCI7 577 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 MRPS30Q9NP92 439 aaKnown RBP6.25□□□□□ -1.41
TRA2B-216ENST00000493864 TMEM9BQ9NQ34 198 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 FARSBQ9NSD9 589 aaKnown RBP6.25□□□□□ -1.41
TRA2B-216ENST00000493864 TMEM184CQ9NVA4 438 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 GEMIN8Q9NWZ8 242 aaKnown RBP6.25□□□□□ -1.41
TRA2B-216ENST00000493864 PSD3Q9NYI0 1048 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 PLA2G3Q9NZ20 509 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 TRPS1Q9UHF7 1281 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 POMT2Q9UKY4 750 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 SNX7Q9UNH6 387 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 BTRCQ9Y297 605 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 STK38LQ9Y2H1 464 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 ENTPD2Q9Y5L3 495 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 DNAJC15Q9Y5T4 150 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 USH1CQ9Y6N9 552 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 KNTC1P50748 2209 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 SPTBP11277 2137 aa6.25□□□□□ -1.41
TRA2B-216ENST00000493864 GOLGA8QA0A0J9YX86 632 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 A0A0J9YY10 115 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 GOLGA8OA6NCC3 632 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 CCDC154A6NI56 674 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SLC9B1P1A6NJY1 282 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FAM171A2A8MVW0 826 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 GOLGA8NF8WBI6 632 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SLCO1B7G3V0H7 640 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 H0YIV9 168 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 PIP5K1BO14986 540 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FLRT2O43155 660 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 OR1F1O43749 312 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SNX3O60493 162 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 UGDHO60701 494 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 DIAPH2O60879 1101 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SH3BGRLO75368 114 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SKAP2O75563 359 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 CCNDBP1O95273 360 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FAM107AO95990 144 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 PDYNP01213 254 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 GASTP01350 101 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 KRT6AP02538 564 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 KRT6BP04259 564 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TROVE2P10155 538 aaKnown RBP eCLIP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 PCNAP12004 261 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ST6GAL1P15907 406 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ALOX15P16050 662 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 CKMT2P17540 419 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 MAGP20916 626 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 EPHA3P29320 983 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 MSX2P35548 267 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 CAPZBP47756 277 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 KRT6CP48668 564 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 DUSP3P51452 185 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 GFERP55789 205 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 REEP5Q00765 189 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 PLP2Q04941 152 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SLC14A1Q13336 389 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ABRAXAS2Q15018 415 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 RBBP5Q15291 538 aaKnown RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ZIC1Q15915 447 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 HIST2H2ACQ16777 129 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 GGTA1PQ4G0N0 100 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 AASDHQ4L235 1098 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SLC9B1Q4ZJI4 515 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FRG2Q64ET8 278 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FCRL6Q6DN72 434 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 HIST2H2AA3Q6FI13 130 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ZNF425Q6IV72 752 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 MED27Q6P2C8 311 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FBXO42Q6P3S6 717 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FAM111BQ6SJ93 734 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FAM92BQ6ZTR7 304 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TMPRSS9Q7Z410 1059 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SPATA21Q7Z572 469 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ADCK2Q7Z695 626 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SPRED1Q7Z699 444 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 PAQR7Q86WK9 346 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 DDIASQ8IXT1 998 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 PQLC1Q8N2U9 271 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 OR6C4Q8NGE1 309 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 WDR20Q8TBZ3 569 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 IFI44Q8TCB0 444 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 BCAS4Q8TDM0 211 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ZNF473Q8WTR7 871 aaKnown RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TWIST2Q8WVJ9 160 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 HOXB13Q92826 284 aaPredicted RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FAR2Q96K12 515 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms