RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 A0A1B0GVI7 797 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TCRBV5S2A0A599 114 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MID1O15344 667 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 DLX3O60479 287 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 AP2A1O95782 977 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PTHP01270 115 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SPI1P17947 270 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 LIMK2P53671 638 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MARCH8Q5T0T0 291 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SFRP5Q5T4F7 317 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ARHGAP40Q5TG30 622 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 RGMBQ6NW40 437 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 FSTL5Q8N475 847 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 DNAJC22Q8N4W6 341 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 RELL2Q8NC24 303 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TTC16Q8NEE8 873 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 BPIFCQ8NFQ6 507 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 OR11H7Q8NGC8 314 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SCARB1Q8WTV0 552 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 AP3S1Q92572 193 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM125Q96AQ2 219 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TOX2Q96NM4 488 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ABCG5Q9H222 651 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PDZD7Q9H5P4 517 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 NANSQ9NR45 359 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 DUSP22Q9NRW4 184 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 GPR83Q9NYM4 423 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TBX20Q9UMR3 447 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 KCNIP3Q9Y2W7 256 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TANC1Q9C0D5 1861 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 MARCH11A6NNE9 402 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 GTPBP1O00178 669 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ICOSLGO75144 302 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ADRB2P07550 413 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ANXA7P20073 488 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 XPAP23025 273 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 GKP32189 559 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SDC2P34741 201 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 DIO1P49895 249 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CXCR4P61073 352 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 YBX1P67809 324 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TWF1Q12792 350 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TBCEQ15813 527 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 HSDL1Q3SXM5 330 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ZPBP2Q6X784 338 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 VSIG10LQ86VR7 867 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CBWD2Q8IUF1 395 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ADGRF3Q8IZF5 1079 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 OR10K1Q8NGX5 313 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CREB3L4Q8TEY5 395 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 DNASE1L2Q92874 299 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CREB3L1Q96BA8 519 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 MRGPRX2Q96LB1 330 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 C12orf66Q96MD2 445 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 NEU1Q99519 415 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PDCD2LQ9BRP1 358 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 POLR1EQ9GZS1 481 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TOLLIPQ9H0E2 274 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SPACA1Q9HBV2 294 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SIRT7Q9NRC8 400 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TAS2R16Q9NYV7 291 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 OR6C2Q9NZP2 312 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SRRDQ9UH36 339 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SCP2D1Q9UJQ7 156 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ADAM28Q9UKQ2 775 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 POMT2Q9UKY4 750 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 GOLT1BQ9Y3E0 138 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 IRAK3Q9Y616 596 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 DNAJC25-GNG10A0A024R161 153 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 FXYD6-FXYD2A0A087WZ82 144 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 LRRC14BA6NHZ5 514 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ARPC5O15511 151 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PIP5K1CO60331 668 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF682O95780 498 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 F2P00734 622 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 VIPP01282 170 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PSAPP07602 524 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SLC2A1P11166 492 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SDHBP21912 280 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CRABP1P29762 137 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 GJA5P36382 358 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 MMP12P39900 470 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ANXA11P50995 505 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 RIPPLY1Q0D2K3 151 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ST3GAL4Q11206 333 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 BIKQ13323 160 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SEMA5AQ13591 1074 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PEA15Q15121 130 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SF3A2Q15428 464 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 OR8G1Q15617 311 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PROX2Q3B8N5 592 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ATP6AP1LQ52LC2 224 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 XKR3Q5GH77 459 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 NHLRC3Q5JS37 347 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 NOTUMQ6P988 496 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ABHD15Q6UXT9 468 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PGAP1Q75T13 922 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 FAM122BQ7Z309 247 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms