RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SLC6A12P48065 614 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 KCNC1P48547 511 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 PGGT1BP53609 377 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 TMEM198Q66K66 360 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 POMZP3Q6PJE2 187 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 KRTAP1-3Q8IUG1 177 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 PM20D2Q8IYS1 436 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 NKAPQ8N5F7 415 aaKnown RBP16.25■□□□□ 0.19
NUP50-218ENST00000493456 TRIM58Q8NG06 486 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 CAPZA3Q96KX2 299 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 KCNC2Q96PR1 638 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 EHD1Q9H4M9 534 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 GPRC5BQ9NZH0 403 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 SPACA6W5XKT8 324 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 C15orf38-AP3S2A0A0A6YYH1 394 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 NPEPPSL1A6NEC2 478 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 CDC7O00311 574 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 CD53P19397 219 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 ZNF136P52737 540 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 NKX6-1P78426 367 aaPredicted RBP16.24■□□□□ 0.19
NUP50-218ENST00000493456 TEDDM1Q5T9Z0 273 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 PRAMEF20Q5VT98 475 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 NSUN5P2Q63ZY6 315 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 CCDC137Q6PK04 289 aaKnown RBP16.24■□□□□ 0.19
NUP50-218ENST00000493456 FRA10AC1Q70Z53 315 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 VN1R5Q7Z5H4 357 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 ADAMTSL2Q86TH1 951 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 C9orf40Q8IXQ3 194 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 SRFBP1Q8NEF9 429 aaKnown RBP16.24■□□□□ 0.19
NUP50-218ENST00000493456 NUDT8Q8WV74 236 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 ART5Q96L15 291 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 YIPF4Q9BSR8 244 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 ZNF395Q9H8N7 513 aaPredicted RBP16.24■□□□□ 0.19
NUP50-218ENST00000493456 PPANQ9NQ55 473 aaKnown RBP16.24■□□□□ 0.19
NUP50-218ENST00000493456 PRDM7Q9NQW5 492 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.24■□□□□ 0.19
NUP50-218ENST00000493456 TRMT1Q9NXH9 659 aaKnown RBP16.24■□□□□ 0.19
NUP50-218ENST00000493456 SLC17A6Q9P2U8 582 aa16.24■□□□□ 0.19
NUP50-218ENST00000493456 CHCHD2Q9Y6H1 151 aaPredicted RBP16.24■□□□□ 0.19
NUP50-218ENST00000493456 IGKV3-11P04433 115 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 FBXO45P0C2W1 286 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 GDF1P27539 372 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 TRPC1P48995 793 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 CRYZQ08257 329 aaKnown RBP16.23■□□□□ 0.19
NUP50-218ENST00000493456 DUSP8Q13202 625 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 CYP1B1Q16678 543 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 TBCELQ5QJ74 424 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 RNASEH2BQ5TBB1 312 aaKnown RBP16.23■□□□□ 0.19
NUP50-218ENST00000493456 LYPD8Q6UX82 237 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 ZNF662Q6ZS27 426 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 FAM13CQ8NE31 585 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 RHBDF1Q96CC6 855 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 SENP5Q96HI0 755 aaPredicted RBP16.23■□□□□ 0.19
NUP50-218ENST00000493456 ZNF597Q96LX8 424 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 JSRP1Q96MG2 331 aaPredicted RBP16.23■□□□□ 0.19
NUP50-218ENST00000493456 DOHHQ9BU89 302 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 PRDM14Q9GZV8 571 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 PROK2Q9HC23 129 aa16.23■□□□□ 0.19
NUP50-218ENST00000493456 ARHGEF9O43307 516 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 CTSSP25774 331 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 SERPINB3P29508 390 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 OPRM1P35372 400 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 GDF5P43026 501 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 STT3AP46977 705 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 IGLV3-21P80748 117 aaPredicted RBP16.22■□□□□ 0.19
NUP50-218ENST00000493456 BIKQ13323 160 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 RASGEF1CQ8N431 466 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 OR10G3Q8NGC4 313 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 LINC01560Q8TB33 94 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 GRK7Q8WTQ7 553 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 ANKRD9Q96BM1 317 aaPredicted RBP16.22■□□□□ 0.19
NUP50-218ENST00000493456 PTCD3Q96EY7 689 aaKnown RBP16.22■□□□□ 0.19
NUP50-218ENST00000493456 DGAT2Q96PD7 388 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 TIMP4Q99727 224 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 MAPKAP1Q9BPZ7 522 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 TBCDQ9BTW9 1192 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 LZTFL1Q9NQ48 299 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 JKAMPQ9P055 326 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 IKBKGQ9Y6K9 419 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 ZANQ9Y493 2812 aa16.22■□□□□ 0.19
NUP50-218ENST00000493456 NCKAP5O14513 1909 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 CD8B2A6NJW9 211 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 KDM4EB2RXH2 506 aaPredicted RBP16.21■□□□□ 0.19
NUP50-218ENST00000493456 EEF1E1-BLOC1S5C9J1V9 151 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 CLGNO14967 610 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 EEF1E1O43324 174 aaKnown RBP16.21■□□□□ 0.19
NUP50-218ENST00000493456 IL18BPO95998 194 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 C1QAP02745 245 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 HRGP04196 525 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 MSH2P43246 934 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 WNT3P56703 355 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 PLIN5Q00G26 463 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 ID2Q02363 134 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 ZNF793Q6ZN11 406 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 PRIMA1Q86XR5 153 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 TCAIMQ8N3R3 496 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 SMPDL3BQ92485 455 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 FBXL20Q96IG2 436 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 COX4I2Q96KJ9 171 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 DACH2Q96NX9 599 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms