RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SSX9Q7RTT3 188 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 C16orf62Q7Z3J2 963 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SYT9Q86SS6 491 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ADIPOR2Q86V24 386 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MYPOPQ86VE0 399 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 RALGPS2Q86X27 583 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 FUNDC1Q8IVP5 155 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MRPL41Q8IXM3 137 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 MARVELD2Q8N4S9 558 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM156Q8N614 296 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TEX26Q8N6G2 289 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TTC9BQ8N6N2 239 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 PTGR2Q8N8N7 351 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 RAB40AQ8WXH6 277 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 LINC01599Q8WXQ3 324 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 LPAR1Q92633 364 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 RIT1Q92963 219 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 HGDQ93099 445 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TCEAL4Q96EI5 215 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SMIM10Q96HG1 83 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 FAM210BQ96KR6 192 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 HARBI1Q96MB7 349 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 PWWP2AQ96N64 755 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SFXN2Q96NB2 322 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 NSUN5Q96P11 429 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 SNX18Q96RF0 628 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 HAPLN3Q96S86 360 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SLC30A2Q9BRI3 323 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SOX7Q9BT81 388 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MSTO1Q9BUK6 570 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 NMUR2Q9GZQ4 415 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 CTDSP1Q9GZU7 261 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ENKD1Q9H0I2 346 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ATXN3LQ9H3M9 355 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MOV10Q9HCE1 1003 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 S100A14Q9HCY8 104 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ABCB9Q9NP78 766 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 PARD6AQ9NPB6 346 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TMLHEQ9NVH6 421 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MTMR10Q9NXD2 777 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ANKFY1Q9P2R3 1169 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 RNF14Q9UBS8 474 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 CNOT8Q9UFF9 292 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF639Q9UID6 485 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ACSL6Q9UKU0 697 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 FLVCR2Q9UPI3 526 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ICKQ9UPZ9 632 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SLC22A13Q9Y226 551 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 OSGIN2Q9Y236 505 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 L3MBTL1Q9Y468 752 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 KPTNQ9Y664 436 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 PRAG1Q86YV5 1406 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 CLUHO75153 1309 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 UMODL1Q5DID0 1318 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TBC1D3KA0A087X1G2 549 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 METTL21EPA6NDL7 271 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 C2orf71A6NGG8 1288 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PRSS29PA6NIE9 313 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 RFPL4AA6NLU0 287 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ANKRD30BLA7E2S9 258 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 A8MUA0 341 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 RFPL4AL1F8VTS6 287 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 RNASEK-C17orf49H0YIS7 233 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 H3BN98 237 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ACOT7O00154 380 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 WNT10BO00744 389 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TRAFD1O14545 582 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ACOX3O15254 700 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ARPC5O15511 151 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 RNMTO43148 476 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SCO2O43819 266 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SSX4O60224 188 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 NRP2O60462 931 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GMDSO60547 372 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 BCAR3O75815 825 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 RAD17O75943 681 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 HAUS5O94927 633 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 OR2F2O95006 317 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 H6PDO95479 791 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CST4P01036 141 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 LCKP06239 509 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 HEXAP06865 529 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 FAM228BP0C875 321 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SPATA31C1P0DKV0 1188 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 THRAP10827 490 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 BMP4P12644 408 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CDH1P12830 882 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 IGFBP2P18065 325 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 IGFBP5P24593 272 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 S100PP25815 95 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SLC6A6P31641 620 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 AHRP35869 848 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 BTDP43251 543 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 COMPP49747 757 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 MEOX2P50222 304 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PPT1P50897 306 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GALK1P51570 392 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TPMTP51580 245 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 KPNA2P52292 529 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 UCP3P55916 312 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms