RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 GPAT3Q53EU6 434 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 MPPE1Q53F39 396 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 PAQR6Q6TCH4 344 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 METTL7BQ6UX53 244 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 WDR49Q8IV35 697 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 RTL3Q8N8U3 475 aaKnown RBP3.28□□□□□ -1.88
CLK1-213ENST00000492793 RELL2Q8NC24 303 aaPredicted RBP3.28□□□□□ -1.88
CLK1-213ENST00000492793 DTD2Q96FN9 168 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 C16orf58Q96GQ5 468 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 RUFY1Q96T51 708 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 ATP6V0BQ99437 205 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 UBXN6Q9BZV1 441 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 GFRA4Q9GZZ7 299 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 SLC26A1Q9H2B4 701 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 GANQ9H2C0 597 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 PARLQ9H300 379 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 LIME1Q9H400 295 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 MOB1AQ9H8S9 216 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 PANK3Q9H999 370 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 DEPPQ9NTK1 212 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 ACOXLQ9NUZ1 547 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 CYP39A1Q9NYL5 469 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 ERVK-18Q9QC07 812 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 NARFQ9UHQ1 456 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 NIP7Q9Y221 180 aaKnown RBP eCLIP3.28□□□□□ -1.88
CLK1-213ENST00000492793 KIF7Q2M1P5 1343 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 IGLV4-3A0A075B6K6 122 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 SH3PXD2BA1X283 911 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 ARHGEF33A8MVX0 844 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 ZBTB14O43829 449 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 SNAP91O60641 907 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 BCAS2O75934 225 aaPredicted RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 TBX6O95947 436 aaPredicted RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 CT45A8P0DMV1 189 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 CT45A9P0DMV2 189 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 CCDC192P0DO97 292 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 CYP3A5P20815 502 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 GLRA1P23415 457 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 CALML3P27482 149 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 ALDH3B1P43353 468 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 VEGFCP49767 419 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 HNRNPFP52597 415 aaKnown RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 SRP54P61011 504 aaKnown RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 WASHC5Q12768 1159 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 TSTA3Q13630 321 aaPredicted RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 BTG3Q14201 252 aaPredicted RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 SLC17A1Q14916 467 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 FCN2Q15485 313 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 CT45A2Q5DJT8 189 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 CMPK2Q5EBM0 449 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 MUC21Q5SSG8 566 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 PRAMEF7Q5VXH5 474 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 C17orf64Q86WR6 236 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 KRTAP7-1Q8IUC3 87 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 BATF2Q8N1L9 274 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 PARP8Q8N3A8 854 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 EXOC6Q8TAG9 804 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 URGCPQ8TCY9 931 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 MRPL53Q96EL3 112 aaKnown RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 RCHY1Q96PM5 261 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 TAAR6Q96RI8 345 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 RAB40CQ96S21 281 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 NUSAP1Q9BXS6 441 aaKnown RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 LRRCC1Q9C099 1032 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 CXXC4Q9H2H0 198 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 DPEP3Q9H4B8 488 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 HEXA-AS1Q9H8Q6 139 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 PRMT8Q9NR22 394 aaPredicted RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 PIGVQ9NUD9 493 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 GTSE1Q9NYZ3 720 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 TECRQ9NZ01 308 aaKnown RBP3.27□□□□□ -1.89
CLK1-213ENST00000492793 APPL1Q9UKG1 709 aa3.27□□□□□ -1.89
CLK1-213ENST00000492793 TRBV2A0A0J9YWF9 115 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 A0A1B0GU03 582 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 K7ERI5 159 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 REC8O95072 547 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 FHP07954 510 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 MMP10P09238 476 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 OR9G9P0C7N8 305 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 MTIF2P46199 727 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 ZFP36L2P47974 494 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 SLC1A6P48664 564 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 CNN1P51911 297 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 LIMK2P53671 638 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 CCZ1BP86790 482 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 CCZ1P86791 482 aaPredicted RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 PAX8Q06710 450 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 HSPA14Q0VDF9 509 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 ITPK1Q13572 414 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 FASTKQ14296 549 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 MEF2DQ14814 521 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 C1orf189Q5VU69 101 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 NKAIN2Q5VXU1 208 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 RAB12Q6IQ22 244 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 CDC42EP5Q6NZY7 148 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 GPRIN3Q6ZVF9 776 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 RABEPKQ7Z6M1 372 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 CHCHD4Q8N4Q1 142 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 PRSS33Q8NF86 280 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 TMEM185AQ8NFB2 350 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms