RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 PRDM9Q9NQV7 894 aa20.76■□□□□ 0.91
PSPC1-204ENST00000492741 NDE1Q9NXR1 346 aa20.76■□□□□ 0.91
PSPC1-204ENST00000492741 CROCCQ5TZA2 2017 aa20.76■□□□□ 0.91
PSPC1-204ENST00000492741 FAM149AA5PLN7 773 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 LDB3O75112 727 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 KLK3P07288 261 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 FHP07954 510 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 ABCB1P08183 1280 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 ZNF28P17035 718 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 AGXTP21549 392 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 FEN1P39748 380 aaKnown RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 HNRNPFP52597 415 aaKnown RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 SLC13A2Q13183 592 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 RSPO4Q2I0M5 234 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 NKAIN1Q4KMZ8 207 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 TMEM164Q5U3C3 297 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 DNAJC14Q6Y2X3 702 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 DHDDSQ86SQ9 333 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 ZNF595Q8IYB9 648 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 DPP10Q8N608 796 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 TMEM52Q8NDY8 209 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 OR4A15Q8NGL6 344 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 MIEF2Q96C03 454 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 INPP5KQ9BT40 448 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 BTNL2Q9UIR0 455 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 CROTQ9UKG9 612 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 SATB2Q9UPW6 733 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 BLACEA4D250 179 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 PMS2P1A4D2B8 440 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 MEN1O00255 615 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 NVLO15381 856 aaKnown RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 SCN2BO60939 215 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 C6orf47O95873 294 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 CSNK2A2P19784 350 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 XKP51811 444 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 FOLH1Q04609 750 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 ZNF750Q32MQ0 723 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 TRMT5Q32P41 509 aaKnown RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 SAMD14Q8IZD0 417 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-204ENST00000492741 LRRC58Q96CX6 371 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 C1orf21Q9H246 121 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 PRTFDC1Q9NRG1 225 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 SLAMF8Q9P0V8 285 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 KIF26BQ2KJY2 2108 aa20.75■□□□□ 0.91
PSPC1-204ENST00000492741 NPPAP01160 153 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 ITGAXP20702 1163 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 PPP2R1BP30154 601 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 MPIP34949 423 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 NCBP2P52298 156 aaKnown RBP eCLIP20.74■□□□□ 0.915e-6■□□□□ 8.3
PSPC1-204ENST00000492741 ID2Q02363 134 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 ZNF621Q6ZSS3 439 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 CCDC116Q8IYX3 515 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 DNAJB8Q8NHS0 232 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 CNRIP1Q96F85 164 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-204ENST00000492741 CCDC115Q96NT0 180 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 OR1F2PQ96R84 312 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 MKKSQ9NPJ1 570 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-204ENST00000492741 SERHLQ9NQF3 203 aa20.74■□□□□ 0.91
PSPC1-204ENST00000492741 IFT80Q9P2H3 777 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-204ENST00000492741 ZNF282Q9UDV7 671 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-204ENST00000492741 FGF17O60258 216 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 JRKO75564 520 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 GPR75O95800 540 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 GSNP06396 782 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 IL10P22301 178 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 PTPRZ1P23471 2315 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 TRPC1P48995 793 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 PCBP4P57723 403 aaKnown RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 OCA2Q04671 838 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 STX4Q12846 297 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 HSPB3Q12988 150 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 CAPRIN1Q14444 709 aaKnown RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 MINDY4Q4G0A6 757 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 DNAL1Q4LDG9 190 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 HACD2Q6Y1H2 254 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 DEFB107AQ8IZN7 70 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 CACTIN-AS1Q8N1I8 211 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 GALNT15Q8N3T1 639 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 ZFP28Q8NHY6 868 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 SLC39A3Q9BRY0 314 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 DDA1Q9BW61 102 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 ACSS1Q9NUB1 689 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 MAN2B2Q9Y2E5 1009 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 A0A096LPI6 279 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 MYOCOSA0A1B0GUC4 107 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 ERN1O75460 977 aaKnown RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 BMP10O95393 424 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 GPC1P35052 558 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 RORAP35398 523 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 CPOXP36551 454 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 VWA2Q5GFL6 755 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 ZNF551Q7Z340 670 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 PRSS58Q8IYP2 241 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 LRRC25Q8N386 305 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 ADAMTS14Q8WXS8 1223 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 OR5P2Q8WZ92 322 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 HOPXQ9BPY8 73 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-204ENST00000492741 GLIPR2Q9H4G4 154 aa20.73■□□□□ 0.91
PSPC1-204ENST00000492741 SLAMF7Q9NQ25 335 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms