RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ADGRD1	Q6QNK2	874 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	SCIMP	Q6UWF3	145 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	C4orf22	Q6V702	233 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	HSDL2	Q6YN16	418 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602		Q6ZPA2	131 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PEX26	Q7Z412	305 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	P4HA3	Q7Z4N8	544 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	VN1R4	Q7Z5H5	301 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	LDB1	Q86U70	411 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	GRAMD2A	Q8IUY3	354 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF610	Q8N9Z0	462 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	KCT2	Q8NC54	265 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PPHLN1	Q8NEY8	458 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	SKA2	Q8WVK7	121 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	ASB11	Q8WXH4	323 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	TP53INP1	Q96A56	240 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PDLIM2	Q96JY6	352 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PANX2	Q96RD6	677 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	JMJD8	Q96S16	334 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	CHP1	Q99653	195 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	SOX7	Q9BT81	388 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	DOHH	Q9BU89	302 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	UNKL	Q9H9P5	680 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PROK2	Q9HC23	129 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PRDM9	Q9NQV7	894 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	EIF2B3	Q9NR50	452 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	ABCF3	Q9NUQ8	709 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	DNAJC11	Q9NVH1	559 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	TAC3	Q9UHF0	121 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	RUVBL2	Q9Y230	463 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	DTX4	Q9Y2E6	619 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	IGKV3D-11	A0A0A0MRZ8	115 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	IGHV4-61	A0A0C4DH41	118 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ERI2	A8K979	691 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602		H7BY64	318 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	CCNDBP1	O95273	360 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	C1orf105	O95561	183 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	TGM6	O95932	706 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	HPN	P05981	417 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	CSF3	P09919	207 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	HKR1	P10072	659 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	PPP2R1B	P30154	601 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	RPL21	P46778	160 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	CDK9	P50750	372 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ARFIP2	P53365	341 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	NAGLU	P54802	743 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	EIF3B	P55884	814 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	RELA	Q04206	551 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	SCGB2A2	Q13296	93 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	DOC2B	Q14184	412 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	SPARCL1	Q14515	664 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	TERF2	Q15554	542 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	PHKG1	Q16816	387 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ASTE1	Q2TB18	679 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	IQCC	Q4KMZ1	466 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	AARS2	Q5JTZ9	985 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ANKRD20A2	Q5SQ80	823 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ANKRD20A1	Q5TYW2	823 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ANKRD20A3	Q5VUR7	823 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ICE2	Q659A1	982 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	DENND5A	Q6IQ26	1287 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	C11orf63	Q6NUN7	778 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	PPP1R21	Q6ZMI0	780 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	DEF8	Q6ZN54	512 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	BBS12	Q6ZW61	710 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	USP43	Q70EL4	1123 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	GSTA5	Q7RTV2	222 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ADGRE4P	Q86SQ3	457 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	DTX2	Q86UW9	622 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	PIANP	Q8IYJ0	282 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF567	Q8N184	647 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	CCDC89	Q8N998	374 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	CAMKV	Q8NCB2	501 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	RNF214	Q8ND24	703 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	KBTBD8	Q8NFY9	601 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	MAGEC3	Q8TD91	643 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	FBF1	Q8TES7	1133 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	PAQR8	Q8TEZ7	354 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	MAIP1	Q8WWC4	291 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ASZ1	Q8WWH4	475 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	SMPDL3A	Q92484	453 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	KRT35	Q92764	455 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF845	Q96IR2	970 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF597	Q96LX8	424 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	FOPNL	Q96NB1	174 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	PRAP1	Q96NZ9	151 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	TBL1Y	Q9BQ87	522 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	TACO1	Q9BSH4	297 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	OSBPL8	Q9BZF1	889 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	TSGA10	Q9BZW7	698 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	GRIP2	Q9C0E4	1043 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	RASSF4	Q9H2L5	321 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	MMP27	Q9H306	513 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	RHBG	Q9H310	441 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	LRRC40	Q9H9A6	602 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	FAIM	Q9NVQ4	179 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms