RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 SHISA7A6NL88 538 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 hCG_2039718K7EN88 272 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SLC1A7O00341 560 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 RTCAO00442 366 aaKnown RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 PDE9AO76083 593 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 RECKO95980 971 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 HTR1AP08908 422 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 IFI6P09912 130 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SMIM10L1P0DMW3 83 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 RHCEP18577 417 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 EFNA1P20827 205 aaPredicted RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 CD247P20963 164 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 HIST1H1TP22492 207 aaPredicted RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 ATP5A1P25705 553 aaKnown RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 ELK4P28324 431 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 PEX19P40855 299 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 MANFP55145 182 aaKnown RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 RPS15AP62244 130 aaKnown RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 SLC35A2P78381 396 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 TGM3Q08188 693 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 PMS2P3Q13401 168 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 RAPSNQ13702 412 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SLC9A5Q14940 896 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 KIR2DS3Q14952 304 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 RAB39AQ14964 217 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 MAPK11Q15759 364 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 MEP1AQ16819 746 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 MICAQ29983 383 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 ANKRD34AQ69YU3 496 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 ISLR2Q6UXK2 745 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 C6orf120Q7Z4R8 191 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 AMIGO1Q86WK6 493 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 C1orf210Q8IVY1 113 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 TMEM145Q8NBT3 493 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 OR10Q1Q8NGQ4 319 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 NFKBIDQ8NI38 313 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 FAM174AQ8TBP5 190 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 GANCQ8TET4 914 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 GIPC3Q8TF64 312 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SLC38A5Q8WUX1 472 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 IPCEF1Q8WWN9 437 aaPredicted RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 KLK6Q92876 244 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 ISOC1Q96CN7 298 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 TM4SF19Q96DZ7 209 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SMIM10Q96HG1 83 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 AMDHD1Q96NU7 426 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SIGLEC11Q96RL6 698 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 BARD1Q99728 777 aaKnown RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 NRTNQ99748 197 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 PIP5K1AQ99755 562 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 DPH7Q9BTV6 452 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 OSGEPL1Q9H4B0 414 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 CCNB1IP1Q9NPC3 277 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SLC35C2Q9NQQ7 365 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 PRDM8Q9NQV8 689 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 SLC2A4RGQ9NR83 387 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 GPR27Q9NS67 375 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 PLCXD1Q9NUJ7 323 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 LYARQ9NX58 379 aaKnown RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 SCHIP1Q9P0W5 487 aaPredicted RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 NTMQ9P121 344 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 USP36Q9P275 1121 aaKnown RBP10.18□□□□□ -0.78
USP4-214ENST00000491791 ENOPH1Q9UHY7 261 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 MMP17Q9ULZ9 603 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 PIAS3Q9Y6X2 628 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 U3KQV3 271 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 NUMA1Q14980 2115 aa10.18□□□□□ -0.78
USP4-214ENST00000491791 CACNA1AO00555 2505 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 OR2A25A4D2G3 310 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 OR52A4PA6NMU1 304 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 PDZK1P1A8MUH7 402 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 TNFRSF11BO00300 401 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 HMGN4O00479 90 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 B4GALT2O60909 372 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 MITFO75030 526 aaPredicted RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 MFN2O95140 757 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 DCNP07585 359 aaKnown RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 CHRM5P08912 532 aaPredicted RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 F3P13726 295 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 PCMT1P22061 227 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 HTR1BP28222 390 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 POLR2IP36954 125 aaKnown RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 TPMTP51580 245 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 STXBP1P61764 594 aaKnown RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 NPRL3Q12980 569 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 CCINQ13939 588 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 KRT33BQ14525 404 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 MAD2L1BPQ15013 274 aaPredicted RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 PROX2Q3B8N5 592 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 NDUFAF5Q5TEU4 345 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 BHLHB9Q6PI77 547 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 CEACAM20Q6UY09 585 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 ZNF793Q6ZN11 406 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 FAM92BQ6ZTR7 304 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 ABI3BPQ7Z7G0 1075 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 CACUL1Q86Y37 369 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 MMP21Q8N119 569 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 TTC29Q8NA56 475 aaPredicted RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 RSC1A1Q92681 617 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms