RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 PRICKLE2Q7Z3G6 844 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TMEM132CQ8N3T6 1108 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 KIF2BQ8N4N8 673 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ANKRD42Q8N9B4 389 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 B3GNT7Q8NFL0 401 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 DNAJB14Q8TBM8 379 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 DAZLQ92904 295 aaKnown RBP15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 DGAT2Q96PD7 388 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MFRPQ9BY79 579 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TEKT2Q9UIF3 430 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CLCA3PQ9Y6N3 262 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 PIEZO2Q9H5I5 2752 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 DOCK10Q96BY6 2186 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TMEM120BA0PK00 339 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 A8MUI8 341 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC28A1O00337 649 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PGRMC2O15173 223 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GPR75O95800 540 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 FGF4P08620 206 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 COX7A2P14406 83 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ALOX15P16050 662 aaPredicted RBP15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TIA1P31483 386 aaKnown RBP eCLIP15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ARRB2P32121 409 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 STT3AP46977 705 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PLIN5Q00G26 463 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 AGBL2Q5U5Z8 902 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ABHD17BQ5VST6 288 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 HHATQ5VTY9 493 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC6A19Q695T7 634 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CLYBLQ8N0X4 340 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC5A8Q8N695 610 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 OR14A16Q8NHC5 309 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 AGR3Q8TD06 166 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PTPMT1Q8WUK0 201 aaPredicted RBP15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 UCN3Q969E3 161 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 NCLNQ969V3 563 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TM4SF18Q96CE8 201 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 VMP1Q96GC9 406 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF354BQ96LW1 612 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PAIP2Q9BPZ3 127 aaKnown RBP15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PELOQ9BRX2 385 aaKnown RBP15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 FAIM2Q9BWQ8 316 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 EBPLQ9BY08 206 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SIRT5Q9NXA8 310 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PPIEQ9UNP9 301 aaKnown RBP15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TRAF6Q9Y4K3 522 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PCDHA9Q9Y5H5 950 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PTGDR2Q9Y5Y4 395 aa15.2■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GNG14A0A1W2PPG7 69 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 C1orf226A1L170 272 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DYTNA2CJ06 578 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 WASHC1A8K0Z3 465 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 C17orf105B2RV13 164 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TMEM114B3SHH9 223 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TMEM233B4DJY2 109 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 RGS14O43566 566 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 HSPA4LO95757 839 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 NEFHP12036 1026 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TNNI3P19429 210 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PIK3R1P27986 724 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CASRP41180 1078 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CLCN2P51788 898 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CES4AQ5XG92 561 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 FCRLBQ6BAA4 426 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GALNT18Q6P9A2 607 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ATG14Q6ZNE5 492 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CRLF3Q8IUI8 442 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ST13P4Q8IZP2 240 aaPredicted RBP15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 APCDD1LQ8NCL9 501 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 MORN4Q8NDC4 146 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TWIST2Q8WVJ9 160 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PNPLA2Q96AD5 504 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 C11orf24Q96F05 449 aaPredicted RBP15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TUBB1Q9H4B7 451 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ABI3Q9P2A4 366 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 B3GNT3Q9Y2A9 372 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CCL27Q9Y4X3 112 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DNAJC15Q9Y5T4 150 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 BSNQ9UPA5 3926 aa15.19■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CPAMD8Q8IZJ3 1885 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SMG1Q96Q15 3661 aaKnown RBP15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TRBV11-1A0A0K0K1C0 115 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 NPIPB8E9PQR5 432 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DYRK3O43781 588 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC28A2O43868 658 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 OR10H2O60403 315 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 LINC00032P0C843 101 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 BGNP21810 368 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PRPH2P23942 346 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GRK2P25098 689 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GSTM5P46439 218 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GPR143P51810 404 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC18A1P54219 525 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ABCE1P61221 599 aaKnown RBP15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ARG2P78540 354 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 NR6A1Q15406 480 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 MEP1AQ16819 746 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 UGT3A2Q3SY77 523 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ACER2Q5QJU3 275 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC48A1Q6P1K1 146 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms