RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CPLX1O14810 134 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 CHMP2AO43633 222 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 SLC37A4O43826 429 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 PFKFB2O60825 505 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 DEXIO95424 95 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 TDP2O95551 362 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 HOXB8P17481 243 aaPredicted RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 ARSEP51690 589 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 PSMC5P62195 406 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 FKBP3Q00688 224 aaKnown RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 PPP2R5CQ13362 524 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 NONOQ15233 471 aaKnown RBP eCLIP2.82□□□□□ -1.96
PHC3-213ENST00000491258 ZNF79Q15937 498 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 SPOUT1Q5T280 376 aaKnown RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 C11orf63Q6NUN7 778 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 MOXD1Q6UVY6 613 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 MIER3Q7Z3K6 550 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 ZNF410Q86VK4 478 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 BLIDQ8IZY5 108 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 SPATA18Q8TC71 538 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 PRPF31Q8WWY3 499 aaKnown RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 THOC1Q96FV9 657 aaKnown RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 RPGRIP1Q96KN7 1286 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 ZNF558Q96NG5 402 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 HSD17B14Q9BPX1 270 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 TEKT3Q9BXF9 490 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 PANK2Q9BZ23 570 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 GCOM2Q9BZD3 368 aaPredicted RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 DHX33Q9H6R0 707 aaKnown RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 KCNMB3Q9NPA1 279 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 PDRG1Q9NUG6 133 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 SPG21Q9NZD8 308 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 SUCLA2Q9P2R7 463 aaPredicted RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 WRAP73Q9P2S5 460 aaPredicted RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 DDX25Q9UHL0 483 aaKnown RBP2.82□□□□□ -1.96
PHC3-213ENST00000491258 NAALAD2Q9Y3Q0 740 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 SELENOKQ9Y6D0 94 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 PRUNE2Q8WUY3 3088 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 AKAP11Q9UKA4 1901 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 FSD2A1L4K1 749 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 TMEM221A6NGB7 291 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 M0R296 226 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 CREB3O43889 395 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 USO1O60763 962 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 SLITRK3O94933 977 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 LYPLA2O95372 231 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 CTDNEP1O95476 244 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 CXCL14O95715 111 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 GCFC2P16383 781 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 OR3A2P47893 321 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 QARSP47897 775 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 SLC11A1P49279 550 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 PTENP60484 403 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 LAMTOR4Q0VGL1 99 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 SMC1AQ14683 1233 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 LETM2Q2VYF4 491 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 UGT3A2Q3SY77 523 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 SYT14P1Q58G82 188 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 PLPP4Q5VZY2 271 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 TWF2Q6IBS0 349 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 CCDC70Q6NSX1 233 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 C3P1Q6ZMU1 363 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 CATSPER4Q7RTX7 472 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 TMEM173Q86WV6 379 aaPredicted RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 C4orf19Q8IY42 314 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 MMD2Q8IY49 270 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 LRRC43Q8N309 656 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 OR7A2PQ8NGA2 310 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 RSPH1Q8WYR4 309 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 CASP10Q92851 521 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 CEP170P1Q96L14 293 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 JPH2Q9BR39 696 aaPredicted RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 MRPL9Q9BYD2 267 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 MTMR12Q9C0I1 747 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 SLC39A8Q9C0K1 460 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 ZBP1Q9H171 429 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 MINDY3Q9H8M7 445 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 PDFQ9HBH1 243 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 Q9N2K0 584 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 XPNPEP1Q9NQW7 623 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 EIF2B3Q9NR50 452 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 TBC1D13Q9NVG8 400 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 ZNF581Q9P0T4 197 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 ZNF148Q9UQR1 794 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 PIN4Q9Y237 131 aaKnown RBP2.81□□□□□ -1.96
PHC3-213ENST00000491258 TMED3Q9Y3Q3 217 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 A0A0G2JMZ2 1700 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 LAMB1P07942 1786 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 GON4LQ3T8J9 2241 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 XIRP2A4UGR9 3374 aa2.81□□□□□ -1.96
PHC3-213ENST00000491258 PLXNB2O15031 1838 aa2.8□□□□□ -1.96
PHC3-213ENST00000491258 PHIPQ8WWQ0 1821 aa2.8□□□□□ -1.96
PHC3-213ENST00000491258 MAST2Q6P0Q8 1798 aa2.8□□□□□ -1.96
PHC3-213ENST00000491258 RBBP6Q7Z6E9 1792 aaKnown RBP2.8□□□□□ -1.96
PHC3-213ENST00000491258 A0A087X0M5 115 aa2.8□□□□□ -1.96
PHC3-213ENST00000491258 A0A1B0GX30 115 aa2.8□□□□□ -1.96
PHC3-213ENST00000491258 C2CD4DB7Z1M9 353 aa2.8□□□□□ -1.96
PHC3-213ENST00000491258 CDX4O14627 284 aaPredicted RBP2.8□□□□□ -1.96
PHC3-213ENST00000491258 DKC1O60832 514 aaKnown RBP eCLIP2.8□□□□□ -1.96
PHC3-213ENST00000491258 NXPH4O95158 308 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms