RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RELAQ04206 551 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TGM3Q08188 693 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 GAB1Q13480 694 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 GNA13Q14344 377 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 UAP1L1Q3KQV9 507 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 IFI44LQ53G44 452 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 C6orf141Q5SZD1 244 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 FAHD1Q6P587 224 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 BHLHB9Q6PI77 547 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 LINC00299Q6ZSB3 139 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 VN1R5Q7Z5H4 357 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 SYT9Q86SS6 491 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TRIM69Q86WT6 500 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 C10orf111Q8N326 155 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TSTD1Q8NFU3 115 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 CDC26Q8NHZ8 85 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 GEMIN6Q8WXD5 167 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 SLC22A18Q96BI1 424 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 MOAP1Q96BY2 351 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 NEURL3Q96EH8 262 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 PDXPQ96GD0 296 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 C7orf34Q96L11 122 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 CAMK1GQ96NX5 476 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 MBOAT4Q96T53 435 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 PITX2Q99697 317 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 SH3GL3Q99963 347 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 FAIM2Q9BWQ8 316 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 NPLQ9BXD5 320 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 GABARAPL3Q9BY60 117 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 AMBRA1Q9C0C7 1298 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 OR51B5Q9H339 312 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 KIR3DX1Q9H7L2 352 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 A4GALTQ9NPC4 353 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 C1GALT1Q9NS00 363 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 FBXL12Q9NXK8 326 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 OR6C2Q9NZP2 312 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 SPASTQ9UBP0 616 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 SLC23A2Q9UGH3 650 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TAC3Q9UHF0 121 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TMEFF2Q9UIK5 374 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 GDF2Q9UK05 429 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 ZFR2Q9UPR6 939 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 NCKAP1Q9Y2A7 1128 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TMEM98Q9Y2Y6 226 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TPRKBQ9Y3C4 175 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 SAMHD1Q9Y3Z3 626 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 A0A1W2PP55 124 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 A0A1W2PPV9 198 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 TCRBV21S2A2A0A5A6 115 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 TMEM247A6NEH6 219 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 E9PQ18 207 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 PLK4O00444 970 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 BCKDKO14874 412 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 YY2O15391 372 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 PDPK1O15530 556 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 NDUFS4O43181 175 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 OR6B1O95007 311 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 C6orf47O95873 294 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 CEACAM5P06731 702 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 KLK1P06870 262 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 IL3P08700 152 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ITIH1P19827 911 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ADH6P28332 368 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 CHI3L1P36222 383 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 CRATP43155 626 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 HMGA2P52926 109 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ADPRHP54922 357 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 PCBP4P57723 403 aaKnown RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 YPEL5P62699 121 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 KCNJ10P78508 379 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 VLDLRP98155 873 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 CDK6Q00534 326 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 EEF1A2Q05639 463 aaKnown RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 TSTA3Q13630 321 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 SCARB2Q14108 478 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 SPIDRQ14159 915 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ADPRMQ3LIE5 342 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 IQCCQ4KMZ1 466 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF385BQ569K4 471 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 PRAMEF8Q5VWM4 474 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 MLIPQ5VWP3 458 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 PRAMEF7Q5VXH5 474 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 KIAA1614Q5VZ46 1190 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 SAXO2Q658L1 398 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 REEP3Q6NUK4 255 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 DHRS4L2Q6PKH6 230 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 TMEM64Q6YI46 380 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 SAMD14Q8IZD0 417 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 NAGSQ8N159 534 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 RNF175Q8N4F7 328 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 CHDHQ8NE62 594 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 OR2A1Q8NGT9 310 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 RAB2BQ8WUD1 216 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 NR4A3Q92570 626 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 C12orf66Q96MD2 445 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 FERD3LQ96RJ6 166 aa8.03□□□□□ -1.12
VTI1A-207ENST00000489357 DPH2Q9BQC3 489 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-207ENST00000489357 APOOQ9BUR5 198 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms