RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 HAPLN2Q9GZV7 340 aa16.89■□□□□ 0.3
NPHP4-209ENST00000489180 CFIP05156 583 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 FAM189BP81408 668 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 HSD17B12Q53GQ0 312 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 CDKL4Q5MAI5 379 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 FAM180BQ6P0A1 224 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 CNKSR3Q6P9H4 555 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 NRROSQ86YC3 692 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 TMIGD2Q96BF3 282 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 WDR77Q9BQA1 342 aaPredicted RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 Q9Y3F1 56 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 A0A1W2PQ45 241 aaPredicted RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 A0A1W2PQY0 241 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 SYN1P17600 705 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 UQCRC1P31930 480 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 AFF1P51825 1210 aaKnown RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 VSX2P58304 361 aaPredicted RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 TBPL1P62380 186 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 C10orf62Q5T681 223 aaPredicted RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 XKRXQ6PP77 449 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 DPY19L3Q6ZPD9 716 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 NR4A3Q92570 626 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 MAL2Q969L2 176 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 PCDH10Q9P2E7 1040 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 MYH8P13535 1937 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 TNFRSF1BP20333 461 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 PVALBP20472 110 aaPredicted RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 RGS19P49795 217 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 CCDC58Q4VC31 144 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 SSX6Q7RTT6 188 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 UMODL1-AS1Q8N2C9 162 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 SLC15A4Q8N697 577 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 FRS2Q8WU20 508 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 LHPPQ9H008 270 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 ATG5Q9H1Y0 275 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 ACTL8Q9H568 366 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 KCNK12Q9HB15 430 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 HTR3EA5X5Y0 456 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 MUSKO15146 869 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 TRAPPC6AO75865 159 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 GGT1P19440 569 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 EIF5AL1Q6IS14 154 aaKnown RBP16.89■□□□□ 0.29
NPHP4-209ENST00000489180 MAPK15Q8TD08 544 aa16.89■□□□□ 0.29
NPHP4-209ENST00000489180 C2orf78A6NCI8 922 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 K7ERQ8 282 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 RTCAO00442 366 aaKnown RBP16.88■□□□□ 0.29
NPHP4-209ENST00000489180 ASGR2P07307 311 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 IL7P13232 177 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 HOXB2P14652 356 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 SLAMF1Q13291 335 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 LSAMPQ13449 338 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 DOC2AQ14183 400 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 IER5LQ5T953 404 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 GPAT4Q86UL3 456 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 RANBP9Q96S59 729 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 SLC6A7Q99884 636 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 HDHD5Q9BXW7 423 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 MRPS17Q9Y2R5 130 aaKnown RBP16.88■□□□□ 0.29
NPHP4-209ENST00000489180 KCPQ6ZWJ8 1503 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 LRIT3Q3SXY7 679 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 SLC44A3Q8N4M1 653 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 WDR20Q8TBZ3 569 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 PCDHGB2Q9Y5G2 931 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 HYKKA2RU49 373 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 NME4O00746 187 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 PCDH17O14917 1159 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 JUPP14923 745 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 GPR4P46093 362 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 BMXP51813 675 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 MS4A2Q01362 244 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 FPGSQ05932 587 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 NKAPLQ5M9Q1 402 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 TMEM69Q5SWH9 247 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 SHFQ7M4L6 423 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 ANKRD13BQ86YJ7 626 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 LRR1Q96L50 414 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 BIRC8Q96P09 236 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 CLDND1Q9NY35 253 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 FGF18O76093 207 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 NRIP1P48552 1158 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 PLGLB1Q02325 96 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 GLYATL1Q969I3 302 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 SRRDQ9UH36 339 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 PCDHGA7Q9Y5G6 932 aa16.88■□□□□ 0.29
NPHP4-209ENST00000489180 SOCS5O75159 536 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 ETFAP13804 333 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 SPHARQ15513 63 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 LRRN1Q6UXK5 716 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 VRTNQ9H8Y1 702 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 UBQLN2Q9UHD9 624 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 IFT52Q9Y366 437 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 G3V2L1 256 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 DHPSP49366 369 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-209ENST00000489180 HTR6P50406 440 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 TXLNGYQ9BZA5 131 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 CUEDC1Q9NWM3 386 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-209ENST00000489180 INSL6Q9Y581 213 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms