RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 DGAT2Q96PD7 388 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 CENPKQ9BS16 269 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 TRIM45Q9H8W5 580 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-206ENST00000489142 MYOTQ9UBF9 498 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 KLF13Q9Y2Y9 288 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-206ENST00000489142 TSC22D4Q9Y3Q8 395 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 CACNA1DQ01668 2161 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 CENPEQ02224 2701 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 A0A1W2PR48 441 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 A0A1W2PS29 197 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 A8MT66 165 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 A8MVJ9 347 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 STX16-NPEPL1H3BU86 382 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 GOLGA8RI6L899 631 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 STX16O14662 325 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 RIPK2O43353 540 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 PEX1O43933 1283 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF354AO60765 605 aaPredicted RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 TUBB4AP04350 444 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 SNRPAP09012 282 aaKnown RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 CNTFP26441 200 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 CDH13P55290 713 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 RNF4P78317 190 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 RBPJQ06330 500 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF750Q32MQ0 723 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 TTC19Q6DKK2 380 aaPredicted RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 CYP20A1Q6UW02 462 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 OR4F6Q8NGB9 312 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 RASL10BQ96S79 203 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 MRPL57Q9BQC6 102 aaKnown RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 MRPL46Q9H2W6 279 aaKnown RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 FARSBQ9NSD9 589 aaKnown RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 DEPPQ9NTK1 212 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 HPF1Q9NWY4 346 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 PHF11Q9UIL8 331 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 YARS2Q9Y2Z4 477 aaKnown RBP13.01□□□□□ -0.33
VTI1A-206ENST00000489142 ASB4Q9Y574 426 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 CELSR2Q9HCU4 2923 aa13.01□□□□□ -0.33
VTI1A-206ENST00000489142 PINLYPA6NC86 204 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 FOXO6A8MYZ6 492 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 TFECO14948 347 aaPredicted RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 PROM1O43490 865 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 ASNA1O43681 348 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 HS6ST1O60243 411 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 CDC40O60508 579 aaKnown RBP eCLIP13□□□□□ -0.33
VTI1A-206ENST00000489142 AIFM1O95831 613 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 RPS17P08708 135 aaKnown RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 ABHD2P08910 425 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 FAM58BPP0C7Q3 252 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 NR2F6P10588 404 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 COL6A2P12110 1019 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 COX7A2P14406 83 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 TLX1P31314 330 aaPredicted RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 STT3AP46977 705 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 IGLV3-21P80748 117 aaPredicted RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 CUL3Q13618 768 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 FRG2Q64ET8 278 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 MRM1Q6IN84 353 aaKnown RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 LETMD1Q6P1Q0 360 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 C3P1Q6ZMU1 363 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 NUDT13Q86X67 352 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 TMEM151AQ8N4L1 468 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 PSD4Q8NDX1 1056 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF483Q8TF39 744 aaPredicted RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 ITLN2Q8WWU7 325 aaPredicted RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 FRG2BQ96QU4 278 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 HBEGFQ99075 208 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 NTMT1Q9BV86 223 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 CNPPD1Q9BV87 410 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 MRPL1Q9BYD6 325 aaKnown RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 EPB41L4BQ9H329 900 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 DDX31Q9H8H2 851 aaKnown RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 TEX10Q9NXF1 929 aaPredicted RBP13□□□□□ -0.33
VTI1A-206ENST00000489142 TMEM216Q9P0N5 145 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 COPS7AQ9UBW8 275 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 TMCO1Q9UM00 188 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 PCNX1Q96RV3 2341 aa13□□□□□ -0.33
VTI1A-206ENST00000489142 FAM166BA8MTA8 275 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 PRSS44E7EML9 344 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 KLRC4-KLRK1H3BQV0 150 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 FOXE1O00358 373 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 KLK1P06870 262 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ALOX15P16050 662 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ABOP16442 354 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 BUD31P41223 144 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 CASP6P55212 293 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 HERVK_113P63132 956 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ERVK-8P63133 956 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 PLIN5Q00G26 463 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ASPHQ12797 758 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 IFT88Q13099 833 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 SLC29A2Q14542 456 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 TCHHL1Q5QJ38 904 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 METTL2BQ6P1Q9 378 aaKnown RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ADGRD1Q6QNK2 874 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms