RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 IBTKQ9P2D0 1353 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-214ENST00000488427 MYH15Q9Y2K3 1946 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 FBN3Q75N90 2809 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 MYO7AQ13402 2215 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 TRAV18A0A075B6X5 111 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 IGHV3OR16-10A0A075B7F0 116 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 hCG_38984A0A1B0GV85 526 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 SERINC4A6NH21 518 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 K7EQD1 137 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 BAG3O95817 575 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 MOCS2O96007 188 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-214ENST00000488427 RBMS1P29558 406 aaKnown RBP3.61□□□□□ -1.83
ITGB1-214ENST00000488427 PKLRP30613 574 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 GPR183P32249 361 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 TFCP2Q12800 502 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 TNK1Q13470 666 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 FAM106AQ4KMX7 169 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 ZRANB3Q5FWF4 1079 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 FAM91A1Q658Y4 838 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 ERO1BQ86YB8 467 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 Q8NBF4 154 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 NCOA7Q8NI08 942 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 NSMAFQ92636 917 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 C2orf48Q96LS8 159 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 PRICKLE1Q96MT3 831 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-214ENST00000488427 MTIF3Q9H2K0 278 aaKnown RBP3.61□□□□□ -1.83
ITGB1-214ENST00000488427 C10orf88Q9H8K7 445 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 KLK13Q9UKR3 277 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 SMAD5-AS1Q9Y6J3 95 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 ZHX2Q9Y6X8 837 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 POLQO75417 2590 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 KALRNO60229 2985 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 SMG1Q96Q15 3661 aaKnown RBP3.61□□□□□ -1.83
ITGB1-214ENST00000488427 CEMIPQ8WUJ3 1361 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 HEG1Q9ULI3 1381 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 UBR5O95071 2799 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-214ENST00000488427 LOC400499M0QZD8 3231 aa3.61□□□□□ -1.83
ITGB1-214ENST00000488427 IGHV4-30-2A0A087WSY4 118 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 C2orf92A0A1B0GVN3 265 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 MEX3AA1L020 520 aaKnown RBP3.6□□□□□ -1.83
ITGB1-214ENST00000488427 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 FLRT2O43155 660 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 KRT3P12035 628 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 F3P13726 295 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 GIFP27352 417 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 OXTRP30559 389 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 TLX1P31314 330 aaPredicted RBP3.6□□□□□ -1.83
ITGB1-214ENST00000488427 PGFP49763 221 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 NPY4RP50391 375 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 PPIL2Q13356 520 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 RNF130Q86XS8 419 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 ERC1Q8IUD2 1116 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 LRTM2Q8N967 370 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 CASP10Q92851 521 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 ATXN7L3BQ96GX2 97 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 ATF6BQ99941 703 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 CENPOQ9BU64 300 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 ANKRD2Q9GZV1 360 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 UBQLN3Q9H347 655 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 IARS2Q9NSE4 1012 aaKnown RBP3.6□□□□□ -1.83
ITGB1-214ENST00000488427 MYO3BQ8WXR4 1341 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 DOPEY2Q9Y3R5 2298 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 NOTCH2Q04721 2471 aa3.6□□□□□ -1.83
ITGB1-214ENST00000488427 ZNF236Q9UL36 1845 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 A0A087WZ39 114 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 SIX3O95343 332 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-214ENST00000488427 SCG2P13521 617 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 ACADSP16219 412 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 C4BPBP20851 252 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 SHC1P29353 583 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 CCND3P30281 292 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-214ENST00000488427 GP5P40197 560 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 SIGLEC14Q08ET2 396 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 FCHO2Q0JRZ9 810 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 RIGQ13278 110 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 GCKRQ14397 625 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 GRB14Q14449 540 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 MTF1Q14872 753 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 DUSP5Q16690 384 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 HIGD2BQ4VC39 106 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 FAM133BQ5BKY9 247 aaKnown RBP3.59□□□□□ -1.83
ITGB1-214ENST00000488427 SPECC1Q5M775 1068 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 TXNRD3NBQ6F5E7 133 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 CPEB2Q7Z5Q1 589 aaKnown RBP3.59□□□□□ -1.83
ITGB1-214ENST00000488427 SLC22A15Q8IZD6 547 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 ANKRD13CQ8N6S4 541 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 LURAP1Q96LR2 239 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 TSSK2Q96PF2 358 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 NDNQ99608 321 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 GTSE1Q9NYZ3 720 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 TICRRQ7Z2Z1 1910 aa3.59□□□□□ -1.83
ITGB1-214ENST00000488427 ASXL3Q9C0F0 2248 aa3.59□□□□□ -1.84
ITGB1-214ENST00000488427 SPEF2Q9C093 1822 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CDK5RAP2Q96SN8 1893 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 EPOPA6NHQ4 379 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 A8MXK9 166 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 KBTBD13C9JR72 458 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 PSMA7O14818 248 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 SAP30O75446 220 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CRLF1O75462 422 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms