RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 RHPN2P1A8MT19 583 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 H0YGG7 62 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 YKT6O15498 198 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 P2RX6O15547 441 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 ABCB1P08183 1280 aaPredicted RBP12.03□□□□□ -0.48
NELFE-209ENST00000488426 ZNF888P0CJ79 500 aaPredicted RBP12.03□□□□□ -0.48
NELFE-209ENST00000488426 CERS1P27544 350 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 RAB8AP61006 207 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 ARF3P61204 181 aaPredicted RBP12.03□□□□□ -0.48
NELFE-209ENST00000488426 MLC1Q15049 377 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 CYP51A1Q16850 503 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 PRSS53Q2L4Q9 553 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 CPZQ66K79 652 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 FRMPD2BQ6IN97 320 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 ADGRG5Q8IZF4 528 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 CANT1Q8WVQ1 401 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 ZCCHC14Q8WYQ9 949 aaKnown RBP12.03□□□□□ -0.48
NELFE-209ENST00000488426 SLCO4A1Q96BD0 722 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 ZBED6CLQ96FA7 236 aaPredicted RBP12.03□□□□□ -0.48
NELFE-209ENST00000488426 TRAPPC9Q96Q05 1148 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 SERINC2Q96SA4 455 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 NLNQ9BYT8 704 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 KLHL25Q9H0H3 589 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 EPB41L1Q9H4G0 881 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 RAD21L1Q9H4I0 556 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 RPF2Q9H7B2 306 aaKnown RBP12.03□□□□□ -0.48
NELFE-209ENST00000488426 ETAA1Q9NY74 926 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 EPHA6Q9UF33 1036 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 RIMS3Q9UJD0 308 aa12.03□□□□□ -0.48
NELFE-209ENST00000488426 CXCR6O00574 342 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 NUDT21O43809 227 aaKnown RBP12.02□□□□□ -0.48
NELFE-209ENST00000488426 ST6GAL1P15907 406 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 CKMT2P17540 419 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 IL10P22301 178 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 PAX7P23759 505 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 PCBP4P57723 403 aaKnown RBP12.02□□□□□ -0.48
NELFE-209ENST00000488426 BTN3A2P78410 334 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 ZC3H12BQ5HYM0 836 aaKnown RBP12.02□□□□□ -0.48
NELFE-209ENST00000488426 IRGCQ6NXR0 463 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 OR4C6Q8NH72 309 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 N4BP2L2Q92802 583 aaPredicted RBP12.02□□□□□ -0.48
NELFE-209ENST00000488426 CD180Q99467 661 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 PRDM9Q9NQV7 894 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 PHF11Q9UIL8 331 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 ANAPC2Q9UJX6 822 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 C15orf41Q9Y2V0 281 aa12.02□□□□□ -0.48
NELFE-209ENST00000488426 NUP214P35658 2090 aaPredicted RBP12.02□□□□□ -0.49
NELFE-209ENST00000488426 LOC105369274A0A096LPK9 316 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 LOC102723532A0A0G2JNH3 316 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 A0A1W2PR48 441 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
NELFE-209ENST00000488426 RFPL3O75679 317 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 FADDQ13158 208 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 INAVAQ3KP66 663 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 TMEM214Q6NUQ4 689 aaKnown RBP12.02□□□□□ -0.49
NELFE-209ENST00000488426 OR4N4Q8N0Y3 316 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 CARFQ8N187 725 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 C10orf111Q8N326 155 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 CSNK1A1LQ8N752 337 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 PAPD5Q8NDF8 572 aaKnown RBP12.02□□□□□ -0.49
NELFE-209ENST00000488426 OR52N2Q8NGI0 321 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 FIG4Q92562 907 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 EXOSC8Q96B26 276 aaKnown RBP12.02□□□□□ -0.49
NELFE-209ENST00000488426 TCTN2Q96GX1 697 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 CCDC3Q9BQI4 270 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 SLC35A5Q9BS91 424 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 CHRNA10Q9GZZ6 450 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 SLC35C2Q9NQQ7 365 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 LRIT1Q9P2V4 623 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 ATG4BQ9Y4P1 393 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 RNF215Q9Y6U7 377 aa12.02□□□□□ -0.49
NELFE-209ENST00000488426 ITPR1Q14643 2758 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 TLCD2A6NGC4 264 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 TXNDC9O14530 226 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 PROM1O43490 865 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 B3GALT2O43825 422 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 PEX1O43933 1283 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 PRAMEF10O60809 474 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 KRT75O95678 551 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 AIFM1O95831 613 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 FCGR1AP12314 374 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 GLB1P16278 677 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 HOXB6P17509 224 aaKnown RBP12.01□□□□□ -0.49
NELFE-209ENST00000488426 ALOX12P18054 663 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 UQCRC2P22695 453 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 NTSP30990 170 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 SOX11P35716 441 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 GPR3P46089 330 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 MANFP55145 182 aaKnown RBP12.01□□□□□ -0.49
NELFE-209ENST00000488426 VAC14Q08AM6 782 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 TARDBPQ13148 414 aaKnown RBP eCLIP12.01□□□□□ -0.49
NELFE-209ENST00000488426 NR1D2Q14995 579 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 RGNQ15493 299 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 TRIP10Q15642 601 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 VMACQ2NL98 169 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 TBCELQ5QJ74 424 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 OGFRL1Q5TC84 451 aaPredicted RBP12.01□□□□□ -0.49
NELFE-209ENST00000488426 ZCCHC8Q6NZY4 707 aaKnown RBP12.01□□□□□ -0.49
NELFE-209ENST00000488426 ZNF551Q7Z340 670 aaPredicted RBP12.01□□□□□ -0.49
NELFE-209ENST00000488426 ZZZ3Q8IYH5 903 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms