RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 NPDC1Q9NQX5 325 aaPredicted RBP14.17□□□□□ -0.14
TRIM50-203ENST00000488217 PNPLA3Q9NST1 481 aa14.17□□□□□ -0.14
TRIM50-203ENST00000488217 MS4A12Q9NXJ0 267 aa14.17□□□□□ -0.14
TRIM50-203ENST00000488217 COPS7AQ9UBW8 275 aa14.17□□□□□ -0.14
TRIM50-203ENST00000488217 ATP6AP2A0A1C7CYW4 349 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 K7EPI3 171 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 DYRK3O43781 588 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 SUSD5O60279 629 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 ATP6AP2O75787 350 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 FAM155BO75949 473 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 HOXD4P09016 255 aaPredicted RBP14.16□□□□□ -0.14
TRIM50-203ENST00000488217 COX7A2P14406 83 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 EPB42P16452 691 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 TLX1P31314 330 aaPredicted RBP14.16□□□□□ -0.14
TRIM50-203ENST00000488217 GMPRP36959 345 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 MAGEA5P43359 124 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 STT3AP46977 705 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 IGLV3-21P80748 117 aaPredicted RBP14.16□□□□□ -0.14
TRIM50-203ENST00000488217 DLG1Q12959 904 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 TESK1Q15569 626 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 KBTBD12Q3ZCT8 623 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 GPR180Q86V85 440 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 DMRTC2Q8IXT2 367 aaPredicted RBP14.16□□□□□ -0.14
TRIM50-203ENST00000488217 NUBPLQ8TB37 319 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 EXT2Q93063 718 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 DGAT2Q96PD7 388 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 SMC6Q96SB8 1091 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 SEMA4BQ9NPR2 832 aaPredicted RBP14.16□□□□□ -0.14
TRIM50-203ENST00000488217 NUDT4Q9NZJ9 180 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 OPTCQ9UBM4 332 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 ACAD8Q9UKU7 415 aa14.16□□□□□ -0.14
TRIM50-203ENST00000488217 FAM90A27PA6NNH2 459 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 UBXN8O00124 270 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 AQP7O14520 342 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 RAD51CO43502 376 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 FGF17O60258 216 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 IGKV3-11P04433 115 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 LTA4HP09960 611 aaKnown RBP14.15□□□□□ -0.14
TRIM50-203ENST00000488217 SLC35E2BP0CK96 405 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 GLI4P10075 376 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 CCL3P10147 92 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 PTX3P26022 381 aaPredicted RBP14.15□□□□□ -0.14
TRIM50-203ENST00000488217 MSX1P28360 303 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 PIK3CBP42338 1070 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 SSR2P43308 183 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 MAGEA4P43358 317 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 DNASE1L1P49184 302 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 PLTPP55058 493 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 ZNF791Q3KP31 576 aaPredicted RBP14.15□□□□□ -0.14
TRIM50-203ENST00000488217 TBC1D1Q86TI0 1168 aaPredicted RBP14.15□□□□□ -0.14
TRIM50-203ENST00000488217 CDH24Q86UP0 819 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 SLC15A4Q8N697 577 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 HUS1BQ8NHY5 278 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 NXNL1Q96CM4 212 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 ATOH8Q96SQ7 321 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 TTYH2Q9BSA4 534 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 SORBS1Q9BX66 1292 aaKnown RBP14.15□□□□□ -0.14
TRIM50-203ENST00000488217 LDAHQ9H6V9 325 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 IGSF5Q9NSI5 407 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 TUBA8Q9NY65 449 aaPredicted RBP14.15□□□□□ -0.14
TRIM50-203ENST00000488217 GRHL1Q9NZI5 618 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 ACOT9Q9Y305 439 aa14.15□□□□□ -0.14
TRIM50-203ENST00000488217 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.15□□□□□ -0.14
TRIM50-203ENST00000488217 NCOA6Q14686 2063 aaPredicted RBP14.14□□□□□ -0.15
TRIM50-203ENST00000488217 TEP1Q99973 2627 aaKnown RBP14.14□□□□□ -0.15
TRIM50-203ENST00000488217 IQANK1A0A1B0GTG1 560 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 FIGNL2A6NMB9 653 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 SUPT3HB4E1H0 165 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 HRKO00198 91 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 PROM1O43490 865 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 KERAO60938 352 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 SUPT3HO75486 399 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 CELA3AP09093 270 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 MTHFD2P13995 350 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 PIGAP37287 484 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 MAN2A2P49641 1150 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 ARFIP1P53367 373 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 RIPPLY3P57055 190 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 CAV1Q03135 178 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 LIPJQ5W064 366 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 CES4AQ5XG92 561 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 C18orf63Q68DL7 685 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 RTL6Q6ICC9 239 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 GRHL2Q6ISB3 625 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 B3GNT6Q6ZMB0 384 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 SPNS3Q6ZMD2 512 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 DGAT2L6Q6ZPD8 337 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 CMC1Q7Z7K0 106 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 CLYBLQ8N0X4 340 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 ZCCHC7Q8N3Z6 543 aaKnown RBP14.14□□□□□ -0.15
TRIM50-203ENST00000488217 TEX9Q8N6V9 391 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 FBF1Q8TES7 1133 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 SARAFQ96BY9 339 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 CENPKQ9BS16 269 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 SH2D2AQ9NP31 389 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 ALKBH4Q9NXW9 302 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 TNFRSF10DQ9UBN6 386 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 UTP11Q9Y3A2 253 aaKnown RBP14.14□□□□□ -0.15
TRIM50-203ENST00000488217 TSC22D4Q9Y3Q8 395 aa14.14□□□□□ -0.15
TRIM50-203ENST00000488217 ATG4BQ9Y4P1 393 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms