RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ACPTQ9BZG2 426 aa3.67□□□□□ -1.82
PTCD3-216ENST00000487043 LAT2Q9GZY6 243 aa3.67□□□□□ -1.82
PTCD3-216ENST00000487043 HSD3B7Q9H2F3 369 aa3.67□□□□□ -1.82
PTCD3-216ENST00000487043 DHX33Q9H6R0 707 aaKnown RBP3.67□□□□□ -1.82
PTCD3-216ENST00000487043 PARVGQ9HBI0 331 aa3.67□□□□□ -1.82
PTCD3-216ENST00000487043 ZBTB20Q9HC78 741 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-216ENST00000487043 POLD4Q9HCU8 107 aa3.67□□□□□ -1.82
PTCD3-216ENST00000487043 SDR39U1Q9NRG7 319 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-216ENST00000487043 PNPLA3Q9NST1 481 aa3.67□□□□□ -1.82
PTCD3-216ENST00000487043 FAF1Q9UNN5 650 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-216ENST00000487043 RPH3AQ9Y2J0 694 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-216ENST00000487043 TEX264Q9Y6I9 313 aa3.67□□□□□ -1.82
PTCD3-216ENST00000487043 MYH9P35579 1960 aaKnown RBP3.67□□□□□ -1.82
PTCD3-216ENST00000487043 A0A0B4J203 849 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 IGKV6-21A0A0C4DH24 114 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 LOC101059948A0A1B0GTJ6 334 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 TRIM49BA6NDI0 452 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 RSPH10B2B2RC85 870 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 PDXKO00764 312 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 MAGEB2O15479 319 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 XPNPEP2O43895 674 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 PRPSAP2O60256 369 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 PRKRAO75569 313 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 DDHD2O94830 711 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 ADCY5O95622 1261 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 FGFR1OPO95684 399 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 LGALS2P05162 132 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 ABHD2P08910 425 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 RSPH10BP0C881 870 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 CYBAP13498 195 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 DARSP14868 501 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 CPA3P15088 417 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 NMT1P30419 496 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SFTPDP35247 375 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 ARL2P36404 184 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 CD86P42081 329 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 HTR6P50406 440 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 LINC00205P59089 165 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 STARD6P59095 220 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 C1QTNF8P60827 252 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 GTF2BQ00403 316 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 FKBP3Q00688 224 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 GCNT1Q02742 428 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 LRRC63Q05C16 580 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SPAG1Q07617 926 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 CCDC173Q0VFZ6 552 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 GAGE5Q13069 117 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 GAGE6Q13070 117 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 TPD52L1Q16890 204 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 KNOP1Q1ED39 458 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 TTC31Q49AM3 519 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 ZCWPW2Q504Y3 356 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 ZC2HC1CQ53FD0 456 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SIGLEC15Q6ZMC9 328 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 C9orf47Q6ZRZ4 202 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 STXBP4Q6ZWJ1 553 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 CATSPER4Q7RTX7 472 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 C1QL2Q7Z5L3 287 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 ASPGQ86U10 573 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 EXOC3L1Q86VI1 746 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 ZNF410Q86VK4 478 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 CSGALNACT2Q8N6G5 542 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 C9orf106Q8NAJ2 232 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 TRPV1Q8NER1 839 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 URGCPQ8TCY9 931 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 CD99L2Q8TCZ2 262 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SLC13A3Q8WWT9 602 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 PRCCQ92733 491 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SLC47A1Q96FL8 570 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 MED30Q96HR3 178 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 IL17FQ96PD4 163 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 TSSK2Q96PF2 358 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 MAP3K3Q99759 626 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 JPH2Q9BR39 696 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 FGFBP2Q9BYJ0 223 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SLC39A8Q9C0K1 460 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SDCBP2Q9H190 292 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 C1orf21Q9H246 121 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 RNF121Q9H920 327 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 XPNPEP1Q9NQW7 623 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 FGF21Q9NSA1 209 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SAMSN1Q9NSI8 373 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 NINJ2Q9NZG7 142 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 TRAF3IP3Q9Y228 551 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 KCNK6Q9Y257 313 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 STRAPQ9Y3F4 350 aaKnown RBP3.66□□□□□ -1.82
PTCD3-216ENST00000487043 UBE4BO95155 1302 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 SYNRGQ9UMZ2 1314 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 THSD7BQ9C0I4 1608 aa3.66□□□□□ -1.82
PTCD3-216ENST00000487043 TRIP12Q14669 1992 aaPredicted RBP3.65□□□□□ -1.82
PTCD3-216ENST00000487043 COL1A2P08123 1366 aa3.65□□□□□ -1.82
PTCD3-216ENST00000487043 TRAV18A0A075B6X5 111 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 RNF103-CHMP3A0A140T963 221 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 A0A1W2PN81 502 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 A0A1W2PS18 150 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 PLSCR5A0PG75 271 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CCDC169A6NNP5 214 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 PRAC2D3DTV9 90 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 E5RGE8 158 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms