RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 PCBP2Q15366 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TERF2Q15554 542 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TSNAXIP1Q2TAA8 658 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 LIPJQ5W064 366 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 GTF2H2CQ6P1K8 395 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 METTL2BQ6P1Q9 378 aaKnown RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TUBA3EQ6PEY2 450 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 ZNF793Q6ZN11 406 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 CHSY3Q70JA7 882 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 GOLGA7Q7Z5G4 137 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 UBE3DQ7Z6J8 389 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 MYLK4Q86YV6 388 aaPredicted RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 CRLF3Q8IUI8 442 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 DMRTC2Q8IXT2 367 aaPredicted RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 IFT20Q8IY31 132 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 ZNF595Q8IYB9 648 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 PLD6Q8N2A8 252 aaKnown RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 KIF2BQ8N4N8 673 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TMEM52Q8NDY8 209 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 NFAM1Q8NET5 270 aaPredicted RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 UHMK1Q8TAS1 419 aaKnown RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 ELP5Q8TE02 316 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 CMTM7Q96FZ5 175 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 SCYL1Q96KG9 808 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 NPAS2Q99743 824 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TBCDQ9BTW9 1192 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 UCK2Q9BZX2 261 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 CDCP1Q9H5V8 836 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 ACTR8Q9H981 624 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 SLC24A3Q9HC58 644 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 LYRM4Q9HD34 91 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 PRDM7Q9NQW5 492 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 PRTFDC1Q9NRG1 225 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 CPSF2Q9P2I0 782 aaKnown RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 SEC14L3Q9UDX4 400 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TMCO1Q9UM00 188 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 NFU1Q9UMS0 254 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 DAPP1Q9UN19 280 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 ZNF835Q9Y2P0 537 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TSC22D4Q9Y3Q8 395 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 PCDHGA11Q9Y5H2 935 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 CLDN16Q9Y5I7 305 aa5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 TNPO3Q9Y5L0 923 aaKnown RBP5.99□□□□□ -1.45
CTDSPL-208ENST00000486978 EXOC1LA0A1B0GW35 172 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 H0YIV9 168 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 STX16-NPEPL1H3BU86 382 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 TGFBR3LH3BV60 316 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RTCAO00442 366 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CYR61O00622 381 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CDK2AP1O14519 115 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 STX16O14662 325 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RIPK2O43353 540 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MAN1A2O60476 641 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CTNSO60931 367 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 SMIM24O75264 130 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 SH3BGRLO75368 114 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MYO1DO94832 1006 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RASAL1O95294 804 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 SIX3O95343 332 aaPredicted RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CRYABP02511 175 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 SNRPAP09012 282 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RHOXF2BP0C7M4 288 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 ESRRAP11474 423 aaPredicted RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 HIST1H1TP22492 207 aaPredicted RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 EEF1DP29692 281 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 HOXC12P31275 282 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CD96P40200 585 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CLCN2P51788 898 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RAP1GDS1P52306 607 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 HNRNPFP52597 415 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 SMSP52788 366 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 PHEXP78562 749 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 OC90Q02509 493 aaPredicted RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 FOLH1Q04609 750 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 DDX39BQ13838 428 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 OR1C1Q15619 314 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 AP5B1Q2VPB7 878 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 ZNF766Q5HY98 468 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 DEPDC1Q5TB30 811 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 LGSNQ5TDP6 509 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 KHDRBS2Q5VWX1 349 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MTFR2Q6P444 385 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 TRMT10CQ7L0Y3 403 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CLNKQ7Z7G1 428 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RPS19BP1Q86WX3 136 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CHERPQ8IWX8 916 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 ARMC10Q8N2F6 343 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RNF175Q8N4F7 328 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MARVELD2Q8N4S9 558 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 HORMAD2Q8N7B1 307 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 PTGR2Q8N8N7 351 aaPredicted RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 ACOT4Q8N9L9 421 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 L3MBTL4Q8NA19 623 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 APCDD1LQ8NCL9 501 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MDS2Q8NDY4 140 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 B3GNT7Q8NFL0 401 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 HUS1BQ8NHY5 278 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RGMAQ96B86 450 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 REPS1Q96D71 796 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MTBPQ96DY7 904 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms